This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ALA 23
LEU 24
-0.0318
LEU 24
HIS 25
0.0725
HIS 25
TRP 26
0.0786
TRP 26
ARG 27
-0.0020
ARG 27
ALA 28
0.0306
ALA 28
ALA 29
0.0412
ALA 29
GLY 30
-0.0094
GLY 30
ALA 31
0.0686
ALA 31
ALA 32
-0.0642
ALA 32
THR 33
-0.0234
THR 33
VAL 34
0.0269
VAL 34
LEU 35
-0.0487
LEU 35
LEU 36
-0.0733
LEU 36
VAL 37
0.0441
VAL 37
ILE 38
-0.0307
ILE 38
VAL 39
-0.0934
VAL 39
LEU 40
0.0274
LEU 40
LEU 41
0.0251
LEU 41
ALA 42
-0.0367
ALA 42
GLY 43
-0.0187
GLY 43
SER 44
0.0194
SER 44
TYR 45
-0.0060
TYR 45
LEU 46
-0.0362
LEU 46
ALA 47
-0.0095
ALA 47
VAL 48
0.0159
VAL 48
LEU 49
-0.0159
LEU 49
ALA 50
-0.0034
ALA 50
GLU 51
-0.0069
GLU 51
ARG 52
0.0099
ARG 52
GLY 53
-0.0091
GLY 53
ALA 54
-0.0022
ALA 54
PRO 55
0.0302
PRO 55
GLY 56
-0.0311
GLY 56
ALA 57
-0.0611
ALA 57
GLN 58
0.0420
GLN 58
LEU 59
0.0130
LEU 59
ILE 60
-0.0240
ILE 60
THR 61
0.0069
THR 61
TYR 62
0.0098
TYR 62
PRO 63
0.0008
PRO 63
ARG 64
0.0094
ARG 64
ALA 65
0.0163
ALA 65
LEU 66
-0.0168
LEU 66
TRP 67
0.0660
TRP 67
TRP 68
0.0314
TRP 68
SER 69
0.0004
SER 69
VAL 70
-0.0073
VAL 70
GLU 71
0.0956
GLU 71
THR 72
0.0066
THR 72
ALA 73
-0.1656
ALA 73
THR 74
0.1639
THR 74
THR 75
-0.0050
THR 75
VAL 76
-0.0700
VAL 76
GLY 77
-0.0717
GLY 77
TYR 78
0.0408
TYR 78
GLY 79
-0.0220
GLY 79
ASP 80
-0.0616
ASP 80
LEU 81
0.0144
LEU 81
TYR 82
0.0105
TYR 82
PRO 83
0.0164
PRO 83
VAL 84
-0.0114
VAL 84
THR 85
-0.0186
THR 85
LEU 86
-0.0016
LEU 86
TRP 87
-0.0136
TRP 87
GLY 88
-0.0123
GLY 88
ARG 89
-0.0015
ARG 89
CYS 90
0.0248
CYS 90
VAL 91
-0.0511
VAL 91
ALA 92
-0.0245
ALA 92
VAL 93
0.0477
VAL 93
VAL 94
-0.1260
VAL 94
VAL 95
-0.0359
VAL 95
MET 96
-0.0103
MET 96
VAL 97
0.0077
VAL 97
ALA 98
-0.1436
ALA 98
GLY 99
-0.0263
GLY 99
ILE 100
0.0046
ILE 100
THR 101
-0.2104
THR 101
SER 102
-0.0538
SER 102
PHE 103
-0.0152
PHE 103
GLY 104
-0.2081
GLY 104
LEU 105
-0.0486
LEU 105
VAL 106
0.1236
VAL 106
THR 107
-0.1007
THR 107
ALA 108
-0.0078
ALA 108
ALA 109
0.1453
ALA 109
LEU 110
0.0992
LEU 110
ALA 111
-0.1474
ALA 111
THR 112
0.0712
THR 112
TRP 113
0.0995
TRP 113
PHE 114
-0.1314
PHE 114
VAL 115
-0.0058
VAL 115
GLY 116
0.0230
GLY 116
ARG 117
-0.1628
ARG 117
GLU 118
0.0437
GLU 118
GLN 119
0.0093
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.