CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  pixdimer  ***

B-factor analysis for ID 2406150025422871487

Overall B-factor prediction

Correlation= 0.542 for 276 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   GLY      5      0.0471     58.0990     20.8800
     6 CA   LEU      6      0.0277     41.9393     15.5500
    14 CA   TYR      7      0.0137     30.3625     11.8600
    26 CA   ARG      8      0.0116     28.5952     14.7100
    37 CA   MET      9      0.0089     26.3778     12.0800
    45 CA   THR     10      0.0079     25.5074     11.4200
    52 CA   TYR     11      0.0081     25.6947     14.2200
    64 CA   ILE     12      0.0076     25.2521     20.5000
    72 CA   SER     13      0.0114     28.4406     26.9500
    78 CA   ARG     14      0.0147     31.1524     35.3300
    89 CA   ALA     15      0.0196     35.2462     50.7600
    94 CA   VAL     16      0.0322     45.6626     67.2800
   101 CA   PRO     17      0.1182    117.0571     75.4700
   108 CA   GLY     18      0.1475    141.3614     72.2300
   112 CA   LEU     19      0.0430     54.6887     75.5400
   120 CA   GLY     20      0.0566     65.9305     86.1200
   124 CA   TYR     21      0.0619     70.3190     90.6400
   136 CA   ASN     22      0.0653     73.1521     88.5700
   144 CA   ASP     23      0.0372     49.8132     85.5700
   152 CA   LEU     24      0.0283     42.4282     83.4800
   160 CA   ARG     25      0.0475     58.3970     84.4300
   171 CA   ASP     26      0.0438     55.3083     85.8700
   179 CA   ILE     27      0.0270     41.3769     78.6100
   187 CA   MET     28      0.0239     38.8497     82.4500
   195 CA   GLY     29      0.0391     51.3932     80.6800
   199 CA   LYS     30      0.0395     51.7662     79.5500
   208 CA   SER     31      0.0240     38.8768     66.4700
   214 CA   GLU     32      0.0235     38.4512     73.6400
   223 CA   VAL     33      0.0386     51.0059     73.6700
   230 CA   ASN     34      0.0330     46.3654     58.3300
   238 CA   ASN     35      0.0205     35.9835     57.4700
   246 CA   SER     36      0.0342     47.3708     58.9800
   252 CA   HIS     37      0.0607     69.3468     56.4700
   262 CA   VAL     38      0.0414     53.3334     47.6600
   269 CA   GLY     39      0.0267     41.1441     43.8900
   273 CA   LEU     40      0.0165     32.6331     35.9700
   281 CA   THR     41      0.0127     29.4888     30.0400
   288 CA   GLY     42      0.0094     26.7778     34.7500
   292 CA   LEU     43      0.0074     25.0814     34.8200
   300 CA   LEU     44      0.0068     24.5827     37.7500
   308 CA   CYS     45      0.0086     26.1367     31.2700
   314 CA   PHE     46      0.0102     27.4521     36.2800
   325 CA   GLY     47      0.0177     33.6790     36.2100
   329 CA   ASN     48      0.0255     40.1000     32.5900
   337 CA   SER     49      0.0203     35.8644     39.0900
   343 CA   ILE     50      0.0130     29.7973     29.3700
   351 CA   PHE     51      0.0074     25.0915     32.6200
   362 CA   LEU     52      0.0060     23.9330     19.5500
   370 CA   GLN     53      0.0059     23.9083     24.7500
   379 CA   ILE     54      0.0066     24.4129     12.6900
   387 CA   LEU     55      0.0082     25.7872     14.3500
   395 CA   GLU     56      0.0107     27.8636     15.0100
   404 CA   GLY     57      0.0146     31.0764     23.2300
   408 CA   SER     58      0.0182     34.1118     19.3800
   414 CA   ARG     59      0.0144     30.8986     11.0900
   425 CA   GLN     60      0.0152     31.5601     24.5900
   434 CA   ALA     61      0.0159     32.2028     18.3200
   439 CA   ILE     62      0.0122     29.1288     17.1000
   447 CA   SER     63      0.0122     29.0962     19.0500
   453 CA   HIS     64      0.0151     31.5155     26.9500
   463 CA   THR     65      0.0137     30.3267     22.2000
   470 CA   TYR     66      0.0110     28.1153     20.5800
   482 CA   HIS     67      0.0148     31.3006     30.2900
   492 CA   ARG     68      0.0169     33.0401     31.3700
   503 CA   ILE     69      0.0138     30.4336     33.2800
   511 CA   LEU     70      0.0136     30.2442     34.7800
   519 CA   GLN     71      0.0217     36.9893     37.2500
   528 CA   ASP     72      0.0249     39.6029     42.2000
   536 CA   PRO     73      0.0384     50.8625     53.0600
   543 CA   ARG     74      0.0272     41.5445     57.3700
   554 CA   HIS     75      0.0215     36.7838     47.1100
   564 CA   HIS     76      0.0275     41.7901     42.1000
   574 CA   SER     77      0.0193     34.9553     36.5500
   580 CA   ALA     78      0.0122     29.1345     16.8000
   585 CA   GLU     79      0.0105     27.6966     20.5600
   594 CA   ILE     80      0.0098     27.1004     16.8500
   602 CA   ILE     81      0.0108     27.9598     15.5000
   610 CA   ALA     82      0.0119     28.8498     14.1300
   615 CA   PHE     83      0.0123     29.2026     17.8900
   626 CA   ASP     84      0.0162     32.3832      9.8600
   634 CA   PRO     85      0.0289     42.9955     19.4100
   641 CA   VAL     86      0.0316     45.2390     21.0400
   648 CA   LEU     87      0.1141    113.6927     22.3700
   656 CA   GLN     88      0.0596     68.4201     37.0300
   665 CA   ARG     89      0.0212     36.5784     36.8000
   676 CA   GLU     90      0.0205     36.0200     45.6000
   685 CA   PHE     91      0.0147     31.1907     50.8800
   696 CA   VAL     92      0.0230     38.0449     59.8800
   703 CA   GLN     93      0.0271     41.4804     66.2600
   712 CA   TRP     94      0.0191     34.8438     61.6400
   726 CA   SER     95      0.0157     32.0138     59.8600
   732 CA   MET     96      0.0130     29.7421     56.2300
   740 CA   LYS     97      0.0130     29.7557     53.0500
   749 CA   LEU     98      0.0122     29.0991     52.2100
   757 CA   VAL     99      0.0150     31.4472     46.2700
   764 CA   GLN    100      0.0170     33.0930     57.9200
   773 CA   ILE    101      0.0245     39.3472     60.2000
   781 CA   ASP    102      0.0674     74.9209     70.7600
   789 CA   SER    105      0.1053    106.4001     82.2400
   795 CA   PRO    106      0.1227    120.8543     85.3300
   802 CA   GLU    107      0.1083    108.8905     75.4800
   811 CA   LYS    108      0.0782     83.8924     76.2600
   820 CA   MET    109      0.0386     51.0043     70.9400
   828 CA   ARG    110      0.0495     60.0277     65.4100
   839 CA   ARG    111      0.0535     63.3620     64.8300
   850 CA   LEU    112      0.0332     46.5539     61.0300
   858 CA   TYR    113      0.0261     40.6436     52.9500
   870 CA   LEU    114      0.0428     54.5158     45.0800
   878 CA   LYS    115      0.0416     53.5199     41.9600
   887 CA   TYR    116      0.0322     45.7303     38.3000
   899 CA   SER    117      0.0362     48.9888     39.5700
   905 CA   GLY    118      0.0644     72.4018     39.2400
   909 CA   GLU    119      0.0598     68.6031     41.9600
   918 CA   VAL    120      0.0688     76.0881     59.6600
   925 CA   ALA    121      0.0427     54.4423     54.7700
   930 CA   PHE    122      0.0228     37.9073     38.2900
   941 CA   MET    123      0.0234     38.3864     39.9400
   949 CA   PRO    124      0.0160     32.2701     30.8700
   956 CA   GLU    125      0.0234     38.3611     33.4800
   965 CA   THR    126      0.0317     45.2620     34.0200
   972 CA   MET    127      0.0272     41.5876     33.1500
   980 CA   THR    128      0.0339     47.1266     28.7800
   987 CA   PRO    129      0.0247     39.4360     27.7400
   994 CA   ALA    130      0.0320     45.5393     28.9500
   999 CA   GLN    131      0.0243     39.1510     27.8200
  1008 CA   CYS    132      0.0156     31.9580     30.1000
  1014 CA   LEU    133      0.0171     33.1291     28.7400
  1022 CA   GLN    134      0.0198     35.4136     41.3000
  1031 CA   PHE    135      0.0142     30.7842     33.5200
  1042 CA   MET    136      0.0111     28.1622     41.3500
  1050 CA   ILE    137      0.0177     33.6798     43.3000
  1058 CA   ASP    138      0.0220     37.2146     44.6500
  1066 CA   ILE    139      0.0184     34.2530     48.2400
  1074 CA   ASP    140      0.0167     32.8160     59.6200
  1082 CA   PRO    141      0.0322     45.6743     61.3000
  1089 CA   ALA    142      0.0415     53.3901     64.8900
  1094 CA   ARG    143      0.0567     66.0719     69.1200
  1105 CA   SER    144      0.1043    105.5817     74.4000
  1111 CA   GLY      5      0.0474     58.2823     32.2800
  1115 CA   LEU      6      0.0281     42.2653     26.3800
  1123 CA   TYR      7      0.0140     30.6330     18.3300
  1135 CA   ARG      8      0.0117     28.6673     26.0000
  1146 CA   MET      9      0.0090     26.4152     23.8100
  1154 CA   THR     10      0.0079     25.5294     21.9100
  1161 CA   TYR     11      0.0083     25.8468     18.7400
  1173 CA   ILE     12      0.0076     25.2904     19.4100
  1181 CA   SER     13      0.0121     29.0214     29.3600
  1187 CA   ARG     14      0.0155     31.8181     38.2300
  1198 CA   ALA     15      0.0209     36.3026     41.8000
  1203 CA   VAL     16      0.0333     46.5736     60.9200
  1210 CA   PRO     17      0.1415    136.3951     65.1700
  1217 CA   GLY     18      0.1565    148.8717     68.5800
  1221 CA   LEU     19      0.0439     55.3910     70.1300
  1229 CA   GLY     20      0.0586     67.6514     87.4700
  1233 CA   TYR     21      0.0618     70.2306     95.4100
  1245 CA   ASN     22      0.0695     76.6322     98.6300
  1253 CA   ASP     23      0.0390     51.3567     90.7100
  1261 CA   LEU     24      0.0296     43.5049     87.9600
  1269 CA   ARG     25      0.0488     59.4576     90.4600
  1280 CA   ASP     26      0.0481     58.8719     86.4200
  1288 CA   ILE     27      0.0308     44.5691     81.1000
  1296 CA   MET     28      0.0275     41.8112     75.8800
  1304 CA   GLY     29      0.0455     56.7092     75.1800
  1308 CA   LYS     30      0.0450     56.3336     72.1200
  1317 CA   SER     31      0.0275     41.7947     66.9400
  1323 CA   GLU     32      0.0261     40.6250     66.4500
  1332 CA   VAL     33      0.0427     54.4091     66.4100
  1339 CA   ASN     34      0.0374     50.0129     59.6600
  1347 CA   ASN     35      0.0235     38.4420     53.7000
  1355 CA   SER     36      0.0411     53.0658     57.2800
  1361 CA   HIS     37      0.0722     78.8707     61.4400
  1371 CA   VAL     38      0.0474     58.3299     47.8400
  1378 CA   GLY     39      0.0298     43.7379     48.9600
  1382 CA   LEU     40      0.0173     33.3697     34.7400
  1390 CA   THR     41      0.0128     29.5714     36.7500
  1397 CA   GLY     42      0.0093     26.7219     38.3600
  1401 CA   LEU     43      0.0073     25.0167     42.8600
  1409 CA   LEU     44      0.0067     24.5463     39.1100
  1417 CA   CYS     45      0.0085     26.0179     30.8200
  1423 CA   PHE     46      0.0103     27.5377     35.1800
  1434 CA   GLY     47      0.0183     34.1320     39.3800
  1438 CA   ASN     48      0.0266     41.0195     30.3000
  1446 CA   SER     49      0.0213     36.6389     45.1400
  1452 CA   ILE     50      0.0133     29.9845     30.9700
  1460 CA   PHE     51      0.0074     25.0827     32.0600
  1471 CA   LEU     52      0.0060     23.9363     17.7700
  1479 CA   GLN     53      0.0060     23.9239     26.0500
  1488 CA   ILE     54      0.0066     24.4340     20.8000
  1496 CA   LEU     55      0.0082     25.8128     22.6200
  1504 CA   GLU     56      0.0108     27.9057     21.7200
  1513 CA   GLY     57      0.0144     30.9638     18.6500
  1517 CA   SER     58      0.0185     34.3188     20.2700
  1523 CA   ARG     59      0.0146     31.1199     18.2000
  1534 CA   GLN     60      0.0150     31.4642     21.2400
  1543 CA   ALA     61      0.0157     31.9859     16.5600
  1548 CA   ILE     62      0.0123     29.2049     17.7400
  1556 CA   SER     63      0.0121     29.0138     24.8200
  1562 CA   HIS     64      0.0152     31.5675     33.4300
  1572 CA   THR     65      0.0137     30.3530     24.9700
  1579 CA   TYR     66      0.0111     28.2005     21.7100
  1591 CA   HIS     67      0.0153     31.6757     26.7100
  1601 CA   ARG     68      0.0171     33.1879     35.6700
  1612 CA   ILE     69      0.0141     30.6932     34.6900
  1620 CA   LEU     70      0.0136     30.2793     35.8100
  1628 CA   GLN     71      0.0204     35.8853     42.9800
  1637 CA   ASP     72      0.0247     39.4881     45.6200
  1645 CA   PRO     73      0.0385     50.9609     59.5900
  1652 CA   ARG     74      0.0271     41.4828     56.1200
  1663 CA   HIS     75      0.0205     36.0117     43.3400
  1673 CA   HIS     76      0.0259     40.4389     41.2700
  1683 CA   SER     77      0.0190     34.7419     31.4700
  1689 CA   ALA     78      0.0118     28.8061     18.5700
  1694 CA   GLU     79      0.0103     27.5375     17.9000
  1703 CA   ILE     80      0.0098     27.0809     22.4500
  1711 CA   ILE     81      0.0108     27.9081     14.7100
  1719 CA   ALA     82      0.0119     28.8362     14.2000
  1724 CA   PHE     83      0.0125     29.3912     11.3600
  1735 CA   ASP     84      0.0165     32.6591     16.2400
  1743 CA   PRO     85      0.0293     43.2630     20.2400
  1750 CA   VAL     86      0.0321     45.6384     19.3100
  1757 CA   LEU     87      0.1212    119.5952     29.4000
  1765 CA   GLN     88      0.0605     69.1720     29.8400
  1774 CA   ARG     89      0.0208     36.2803     33.5300
  1785 CA   GLU     90      0.0205     35.9861     40.1300
  1794 CA   PHE     91      0.0146     31.0805     47.8900
  1805 CA   VAL     92      0.0231     38.1614     57.9600
  1812 CA   GLN     93      0.0288     42.8423     68.2800
  1821 CA   TRP     94      0.0201     35.6233     65.4300
  1835 CA   SER     95      0.0166     32.7348     68.9000
  1841 CA   MET     96      0.0136     30.2287     71.4200
  1849 CA   LYS     97      0.0127     29.5205     60.8000
  1858 CA   LEU     98      0.0120     28.9586     53.7500
  1866 CA   VAL     99      0.0146     31.0608     48.0600
  1873 CA   GLN    100      0.0170     33.0584     59.1700
  1882 CA   ILE    101      0.0261     40.6667     63.6700
  1890 CA   ASP    102      0.0753     81.4410     72.3400
  1898 CA   SER    105      0.0980    100.3261     80.8300
  1904 CA   PRO    106      0.1048    105.9237     78.4600
  1911 CA   GLU    107      0.0850     89.5534     74.1700
  1920 CA   LYS    108      0.0616     70.1297     73.8400
  1929 CA   MET    109      0.0327     46.1082     70.5000
  1937 CA   ARG    110      0.0431     54.7257     60.9600
  1948 CA   ARG    111      0.0516     61.8076     56.3700
  1959 CA   LEU    112      0.0315     45.0826     54.1400
  1967 CA   TYR    113      0.0256     40.2503     45.9600
  1979 CA   LEU    114      0.0420     53.8667     33.8900
  1987 CA   LYS    115      0.0401     52.2938     40.6500
  1996 CA   TYR    116      0.0301     43.9343     38.2700
  2008 CA   SER    117      0.0350     48.0119     28.9200
  2014 CA   GLY    118      0.0638     71.9359     26.2600
  2018 CA   GLU    119      0.0614     69.9073     32.3400
  2027 CA   VAL    120      0.0701     77.1783     36.4100
  2034 CA   ALA    121      0.0421     53.9189     40.6200
  2039 CA   PHE    122      0.0227     37.8314     38.5600
  2050 CA   MET    123      0.0224     37.5444     35.5100
  2058 CA   PRO    124      0.0153     31.6573     32.8600
  2065 CA   GLU    125      0.0208     36.2183     28.3300
  2074 CA   THR    126      0.0283     42.4269     34.0600
  2081 CA   MET    127      0.0238     38.7505     28.2800
  2089 CA   THR    128      0.0319     45.4460     36.8000
  2096 CA   PRO    129      0.0228     37.9324     26.5400
  2103 CA   ALA    130      0.0304     44.2303     27.7700
  2108 CA   GLN    131      0.0230     38.0779     27.0300
  2117 CA   CYS    132      0.0147     31.2052     29.5100
  2123 CA   LEU    133      0.0161     32.3786     22.3600
  2131 CA   GLN    134      0.0190     34.7771     33.8600
  2140 CA   PHE    135      0.0138     30.4501     31.8200
  2151 CA   MET    136      0.0104     27.6132     33.5600
  2159 CA   ILE    137      0.0169     32.9738     37.7300
  2167 CA   ASP    138      0.0207     36.1437     41.2200
  2175 CA   ILE    139      0.0171     33.1629     44.5500
  2183 CA   ASP    140      0.0158     32.1015     53.1700
  2191 CA   PRO    141      0.0310     44.7154     58.8300
  2198 CA   ALA    142      0.0403     52.4557     61.5900
  2203 CA   ARG    143      0.0545     64.2192     59.4900
  2214 CA   SER    144      0.0991    101.1983     73.9500

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.