Should you encounter any unexpected behaviour,
please let us know.

* 5WGD_A *

B-factor analysis for ID 2404102226553446872

Overall B-factor prediction

Correlation= 0.532 for 233 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA LEU 308 0.0599 29.5011 55.5100
10 CA SER 309 0.1505 54.4210 58.8100
15 CA LEU 310 0.0647 30.8234 46.4500
20 CA THR 311 0.0564 28.5322 38.0300
27 CA ALA 312 0.0247 19.8064 34.8400
32 CA ASP 313 0.0349 22.6109 33.8300
40 CA GLN 314 0.0375 23.3400 31.8700
49 CA MET 315 0.0188 18.1768 27.8000
57 CA VAL 316 0.0187 18.1543 27.0700
64 CA SER 317 0.0283 20.8115 29.2800
70 CA ALA 318 0.0188 18.1971 28.3800
75 CA LEU 319 0.0126 16.4719 21.7800
83 CA LEU 320 0.0207 18.7229 22.6800
91 CA ASP 321 0.0346 22.5389 28.9600
99 CA ALA 322 0.0171 17.7266 21.4100
104 CA GLU 323 0.0177 17.8826 18.4300
113 CA PRO 324 0.0240 19.6222 18.1300
120 CA PRO 325 0.0399 23.9946 22.5100
127 CA ILE 326 0.0241 19.6378 22.3000
135 CA LEU 327 0.0184 18.0691 18.4200
143 CA TYR 328 0.0232 19.3883 16.9700
155 CA SER 329 0.0175 17.8355 19.2000
161 CA GLU 330 0.0297 21.1850 26.0400
170 CA TYR 331 0.0254 20.0052 25.6300
182 CA ASP 332 0.0880 37.2212 26.8900
190 CA PRO 333 0.1093 43.0767 30.2600
197 CA THR 334 0.2044 69.2271 26.6100
204 CA ARG 335 0.1773 61.7759 27.8900
209 CA PRO 336 0.0937 38.7833 25.5100
216 CA PHE 337 0.0383 23.5399 21.1300
227 CA SER 338 0.0400 24.0081 26.1700
233 CA GLU 339 0.0222 19.1132 19.7700
242 CA ALA 340 0.0256 20.0517 20.7200
247 CA SER 341 0.0267 20.3498 20.7700
253 CA MET 342 0.0134 16.6983 17.3800
261 CA MET 343 0.0129 16.5532 15.2300
269 CA GLY 344 0.0180 17.9704 17.3200
273 CA LEU 345 0.0142 16.9318 17.6700
281 CA LEU 346 0.0112 16.1113 14.7200
289 CA THR 347 0.0135 16.7313 14.7800
296 CA ASN 348 0.0160 17.4180 16.4300
304 CA LEU 349 0.0115 16.1770 15.7300
312 CA ALA 350 0.0129 16.5637 15.4200
317 CA ASP 351 0.0141 16.9023 16.3500
325 CA ARG 352 0.0141 16.9011 16.0000
336 CA GLU 353 0.0132 16.6511 30.0000
345 CA LEU 354 0.0121 16.3471 16.4400
353 CA VAL 355 0.0175 17.8282 18.2400
360 CA HIS 356 0.0142 16.9119 13.8800
370 CA MET 357 0.0104 15.8710 11.8200
378 CA ILE 358 0.0182 18.0327 15.0800
386 CA ASN 359 0.0214 18.9086 18.3400
394 CA TRP 360 0.0113 16.1241 15.1600
408 CA ALA 361 0.0102 15.8346 12.2900
413 CA LYS 362 0.0158 17.3524 16.4600
420 CA ARG 363 0.0162 17.4708 19.0400
431 CA VAL 364 0.0093 15.5816 17.7600
438 CA PRO 365 0.0116 16.1981 26.1800
445 CA GLY 366 0.0209 18.7629 26.4100
449 CA PHE 367 0.0131 16.6226 17.8900
460 CA VAL 368 0.0277 20.6477 27.3900
467 CA ASP 369 0.0403 24.0966 29.4000
475 CA LEU 370 0.0333 22.1742 18.7200
483 CA THR 371 0.0555 28.2694 20.4900
490 CA LEU 372 0.0714 32.6409 20.1200
498 CA HIS 373 0.0678 31.6695 20.9200
508 CA ASP 374 0.0309 21.5030 18.5400
516 CA GLN 375 0.0210 18.7897 13.7000
525 CA VAL 376 0.0253 19.9809 17.4100
532 CA HIS 377 0.0190 18.2313 18.2500
542 CA LEU 378 0.0089 15.4771 13.2700
550 CA LEU 379 0.0094 15.6036 14.4900
558 CA GLU 380 0.0134 16.6916 14.3400
568 CA CYS 381 0.0114 16.1441 13.5400
569 CA CYS 381 0.0114 16.1435 13.5400
579 CA ALA 382 0.0080 15.2259 13.1500
584 CA TRP 383 0.0075 15.0787 10.4300
598 CA LEU 384 0.0076 15.1109 11.4800
606 CA GLU 385 0.0070 14.9406 10.6000
615 CA ILE 386 0.0057 14.5773 10.9200
623 CA LEU 387 0.0066 14.8238 9.7100
631 CA MET 388 0.0065 14.8039 12.1500
639 CA ILE 389 0.0060 14.6578 12.9000
647 CA GLY 390 0.0081 15.2348 13.9400
651 CA LEU 391 0.0074 15.0560 13.5100
659 CA VAL 392 0.0091 15.5255 15.6900
666 CA TRP 393 0.0086 15.3919 12.9700
680 CA ARG 394 0.0113 16.1328 18.6600
691 CA SER 395 0.0110 16.0319 17.5800
697 CA MET 396 0.0141 16.8951 26.2700
705 CA GLU 397 0.0292 21.0591 34.9900
710 CA HIS 398 0.0266 20.3212 31.5800
720 CA PRO 399 0.0310 21.5453 29.3100
727 CA GLY 400 0.0242 19.6835 25.3300
731 CA LYS 401 0.0152 17.1912 20.5700
740 CA LEU 402 0.0093 15.5899 18.5600
748 CA LEU 403 0.0103 15.8616 17.0900
756 CA PHE 404 0.0097 15.6937 17.1300
767 CA ALA 405 0.0124 16.4312 15.7300
772 CA PRO 406 0.0244 19.7351 20.4300
779 CA ASN 407 0.0232 19.4096 22.4500
787 CA LEU 408 0.0127 16.5088 19.7500
795 CA LEU 409 0.0127 16.5006 23.5400
803 CA LEU 410 0.0133 16.6775 22.5800
811 CA ASP 411 0.0169 17.6555 28.9200
819 CA ARG 412 0.0205 18.6548 26.6100
830 CA ASN 413 0.0298 21.2202 28.0300
838 CA GLN 414 0.0170 17.6906 25.9000
847 CA GLY 415 0.0153 17.2220 23.9900
851 CA LYS 416 0.0227 19.2681 19.9600
860 CA CYS 417 0.0209 18.7552 26.5400
866 CA VAL 418 0.0177 17.8981 19.2700
873 CA GLU 419 0.0242 19.6775 24.9400
878 CA GLY 420 0.0222 19.1182 25.3200
882 CA MET 421 0.0151 17.1742 20.4100
890 CA VAL 422 0.0171 17.7126 21.5100
897 CA GLU 423 0.0233 19.4203 21.9000
902 CA ILE 424 0.0133 16.6708 18.1300
910 CA PHE 425 0.0106 15.9424 18.0900
921 CA ASP 426 0.0155 17.2706 18.5900
929 CA MET 427 0.0144 16.9668 17.9700
937 CA LEU 428 0.0103 15.8411 12.7800
945 CA LEU 429 0.0117 16.2338 16.5500
953 CA ALA 430 0.0180 17.9821 19.8700
958 CA THR 431 0.0132 16.6622 19.5500
965 CA SER 432 0.0124 16.4263 18.8800
971 CA SER 433 0.0171 17.7177 21.3500
977 CA ARG 434 0.0166 17.5738 19.5300
988 CA PHE 435 0.0119 16.2849 18.4600
999 CA ARG 436 0.0188 18.1858 23.9900
1010 CA MET 437 0.0284 20.8401 25.2600
1015 CA MET 438 0.0212 18.8378 23.8900
1023 CA ASN 439 0.0273 20.5171 25.5600
1031 CA LEU 440 0.0128 16.5495 18.2900
1039 CA GLN 441 0.0190 18.2511 21.2200
1048 CA GLY 442 0.0164 17.5384 18.5800
1052 CA GLU 443 0.0125 16.4472 18.3200
1061 CA GLU 444 0.0086 15.3849 17.7000
1070 CA PHE 445 0.0073 15.0151 14.2200
1081 CA VAL 446 0.0081 15.2386 14.6400
1088 CA CYS 447 0.0066 14.8204 14.0400
1094 CA LEU 448 0.0060 14.6700 11.9100
1102 CA LYS 449 0.0060 14.6757 14.4400
1112 CA SER 450 0.0065 14.7933 12.5500
1113 CA SER 450 0.0065 14.7982 12.3800
1123 CA ILE 451 0.0066 14.8385 12.4500
1131 CA ILE 452 0.0061 14.7023 11.8300
1139 CA LEU 453 0.0056 14.5581 11.5200
1147 CA LEU 454 0.0078 15.1666 11.6200
1155 CA ASN 455 0.0112 16.1097 12.4300
1163 CA SER 456 0.0118 16.2619 18.2000
1169 CA GLY 457 0.0141 16.9069 16.8300
1173 CA VAL 458 0.0270 20.4506 21.6900
1180 CA TYR 459 0.0746 33.5318 30.4100
1189 CA THR 460 0.1180 45.4784 37.8300
1196 CA ASP 473 0.0762 33.9650 46.2300
1201 CA HIS 474 0.0411 24.3094 45.2000
1211 CA ILE 475 0.0215 18.9443 32.3400
1219 CA HIS 476 0.0285 20.8642 31.5100
1229 CA ARG 477 0.0321 21.8421 30.0300
1240 CA VAL 478 0.0186 18.1449 22.9500
1247 CA LEU 479 0.0160 17.4243 17.6800
1255 CA ASP 480 0.0250 19.9018 18.4800
1263 CA LYS 481 0.0166 17.5881 21.3400
1272 CA ILE 482 0.0108 15.9851 17.4700
1280 CA THR 483 0.0174 17.8048 16.1500
1287 CA ASP 484 0.0212 18.8456 21.7800
1295 CA THR 485 0.0122 16.3859 20.3600
1302 CA LEU 486 0.0101 15.7901 17.9800
1310 CA ILE 487 0.0183 18.0411 16.6500
1318 CA HIS 488 0.0251 19.9315 21.5400
1328 CA LEU 489 0.0180 17.9583 19.6300
1336 CA MET 490 0.0189 18.2121 17.8100
1344 CA ALA 491 0.0421 24.5836 23.1300
1349 CA LYS 492 0.0846 36.2940 26.9900
1354 CA ALA 493 0.0853 36.4664 29.0200
1359 CA GLY 494 0.1110 43.5458 27.3400
1364 CA LEU 495 0.0550 28.1462 21.0600
1365 CA LEU 495 0.0551 28.1645 21.3900
1379 CA THR 496 0.0815 35.4403 21.0900
1386 CA LEU 497 0.0944 38.9834 17.5300
1394 CA GLN 498 0.0888 37.4474 16.3500
1403 CA GLN 499 0.0506 26.9437 15.7000
1412 CA GLN 500 0.0297 21.1790 17.2000
1421 CA HIS 501 0.0453 25.4712 13.7100
1431 CA GLN 502 0.0445 25.2466 12.5800
1440 CA ARG 503 0.0164 17.5186 11.6600
1451 CA LEU 504 0.0159 17.3896 12.6700
1459 CA ALA 505 0.0249 19.8532 12.8100
1464 CA GLN 506 0.0216 18.9584 12.5500
1473 CA LEU 507 0.0123 16.4017 15.6700
1481 CA LEU 508 0.0167 17.6023 14.3400
1489 CA LEU 509 0.0264 20.2889 14.6300
1497 CA ILE 510 0.0143 16.9542 12.9600
1505 CA LEU 511 0.0116 16.2016 16.1300
1513 CA SER 512 0.0210 18.7984 12.9000
1514 CA SER 512 0.0210 18.7834 13.0100
1522 CA HIS 513 0.0167 17.6030 10.9000
1532 CA ILE 514 0.0107 15.9505 11.6000
1540 CA ARG 515 0.0120 16.3075 12.6100
1551 CA HIS 516 0.0151 17.1722 14.8100
1561 CA MET 517 0.0101 15.8085 12.7100
1569 CA SER 518 0.0096 15.6547 13.1200
1575 CA ASN 519 0.0144 16.9827 13.6400
1583 CA LYS 520 0.0165 17.5472 13.4000
1592 CA GLY 521 0.0149 17.1029 13.9600
1596 CA MET 522 0.0121 16.3583 14.1200
1604 CA GLU 523 0.0210 18.7964 15.2200
1613 CA HIS 524 0.0158 17.3617 14.8100
1623 CA LEU 525 0.0133 16.6891 14.6500
1631 CA TYR 526 0.0181 17.9918 14.9800
1644 CA SER 527 0.0231 19.3702 18.0400
1645 CA SER 527 0.0230 19.3354 18.3100
1655 CA MET 528 0.0184 18.0883 17.3100
1663 CA LYS 529 0.0221 19.1060 15.9000
1672 CA CYS 530 0.0346 22.5223 18.7100
1678 CA LYS 531 0.0468 25.8965 23.4900
1687 CA ASN 532 0.0604 29.6346 19.0900
1695 CA VAL 533 0.0258 20.1171 22.5800
1702 CA VAL 534 0.0239 19.5988 21.3700
1709 CA PRO 535 0.0367 23.1073 25.7200
1716 CA LEU 536 0.0252 19.9569 20.4000
1724 CA SER 537 0.0394 23.8460 23.2800
1730 CA ASP 538 0.0524 27.4186 25.8500
1738 CA LEU 539 0.0255 20.0257 20.6700
1746 CA LEU 540 0.0161 17.4550 18.0700
1754 CA LEU 541 0.0232 19.3915 19.6000
1762 CA GLU 542 0.0302 21.3115 20.3200
1771 CA MET 543 0.0136 16.7512 21.6100
1779 CA LEU 544 0.0136 16.7480 22.7000
1787 CA ASP 545 0.0299 21.2372 27.1100
1795 CA ALA 546 0.0326 21.9706 26.8300
1800 CA HIS 547 0.0310 21.5497 26.7100

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.