Should you encounter any unexpected behaviour,
please let us know.

* MEMBRANE PROTEIN 10-MAY-18 6DDF *

B-factor analysis for ID 220323001940131206

Overall B-factor prediction

Correlation= 0.008 for 281 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA MET 65 0.3566 111.7898 45.2600
10 CA VAL 66 0.1803 75.2589 44.2800
17 CA THR 67 0.0762 53.7016 40.4900
24 CA ALA 68 0.0530 48.8951 51.2300
29 CA ILE 69 0.0674 51.8685 49.4400
37 CA THR 70 0.0718 52.7850 50.8300
44 CA ILE 71 0.0330 44.7445 48.3300
52 CA MET 72 0.0278 43.6606 54.3400
60 CA ALA 73 0.0505 48.3811 57.9700
65 CA LEU 74 0.0494 48.1400 60.6400
73 CA TYR 75 0.0179 41.6069 53.2900
85 CA SER 76 0.0185 41.7488 57.8400
91 CA ILE 77 0.0300 44.1166 57.7300
99 CA VAL 78 0.0182 41.6731 56.9200
106 CA CYS 79 0.0155 41.1270 57.9000
112 CA VAL 80 0.0254 43.1807 61.2200
119 CA VAL 81 0.0236 42.7913 62.0200
126 CA GLY 82 0.0150 41.0092 61.5100
130 CA LEU 83 0.0153 41.0883 64.0500
138 CA PHE 84 0.0267 43.4498 64.9100
149 CA GLY 85 0.0168 41.3909 65.2000
153 CA ASN 86 0.0128 40.5686 64.6600
161 CA PHE 87 0.0245 42.9759 67.0400
172 CA LEU 88 0.0231 42.7037 67.3800
180 CA VAL 89 0.0158 41.1741 67.9600
187 CA MET 90 0.0168 41.3899 66.9900
195 CA TYR 91 0.0337 44.8865 71.5500
207 CA VAL 92 0.0301 44.1439 72.8200
214 CA ILE 93 0.0208 42.2239 72.0900
222 CA VAL 94 0.0336 44.8778 74.8100
229 CA ARG 95 0.0510 48.4833 75.6200
240 CA TYR 96 0.0490 48.0648 79.0400
252 CA THR 97 0.0402 46.2377 77.3400
259 CA LYS 98 0.0543 49.1627 75.9600
268 CA MET 99 0.0339 44.9368 70.7300
276 CA LYS 100 0.0535 48.9988 66.4800
285 CA THR 101 0.0361 45.3924 61.2800
292 CA ALA 102 0.0227 42.6143 56.0300
297 CA THR 103 0.0174 41.5143 56.3200
304 CA ASN 104 0.0157 41.1598 59.7800
312 CA ILE 105 0.0145 40.9050 56.1000
320 CA TYR 106 0.0110 40.1898 50.5600
332 CA ILE 107 0.0105 40.0793 52.0200
340 CA PHE 108 0.0116 40.3027 55.2900
351 CA ASN 109 0.0099 39.9548 50.7600
359 CA LEU 110 0.0091 39.7888 51.1200
367 CA ALA 111 0.0106 40.0954 54.4600
372 CA LEU 112 0.0112 40.2390 54.6600
380 CA ALA 113 0.0097 39.9151 51.4700
385 CA ASP 114 0.0093 39.8384 54.9700
393 CA ALA 115 0.0106 40.1012 57.8000
398 CA LEU 116 0.0110 40.1936 54.2600
406 CA ALA 117 0.0102 40.0226 51.1500
411 CA THR 118 0.0102 40.0233 56.6100
418 CA SER 119 0.0127 40.5343 55.0500
424 CA THR 120 0.0109 40.1703 50.1300
431 CA LEU 121 0.0109 40.1711 51.8700
439 CA PRO 122 0.0138 40.7616 47.7000
446 CA PHE 123 0.0140 40.8051 44.3800
457 CA GLN 124 0.0123 40.4465 43.7700
466 CA SER 125 0.0170 41.4220 44.1600
472 CA VAL 126 0.0199 42.0362 38.0100
479 CA ASN 127 0.0205 42.1500 40.0700
487 CA TYR 128 0.0210 42.2629 43.4800
499 CA LEU 129 0.0348 45.1170 43.9200
507 CA MET 130 0.0462 47.4903 35.7200
515 CA GLY 131 0.0486 47.9806 38.0800
519 CA THR 132 0.0385 45.8755 38.2500
526 CA TRP 133 0.0252 43.1233 40.7300
540 CA PRO 134 0.0359 45.3376 38.9700
547 CA PHE 135 0.0332 44.7873 42.4200
558 CA GLY 136 0.0425 46.7181 43.6500
562 CA ASN 137 0.0404 46.2855 44.6800
570 CA ILE 138 0.0618 50.7161 47.0700
578 CA LEU 139 0.0301 44.1546 45.6000
586 CA CYS 140 0.0199 42.0387 46.9800
592 CA LYS 141 0.0203 42.1066 44.9600
601 CA ILE 142 0.0256 43.2139 45.2400
609 CA VAL 143 0.0153 41.0844 44.6000
616 CA ILE 144 0.0136 40.7274 41.2900
624 CA SER 145 0.0138 40.7610 42.0600
630 CA ILE 146 0.0131 40.6134 43.1900
638 CA ASP 147 0.0108 40.1561 40.8300
646 CA TYR 148 0.0108 40.1428 39.7200
658 CA TYR 149 0.0112 40.2246 42.3200
670 CA ASN 150 0.0108 40.1386 42.8800
678 CA MET 151 0.0097 39.9142 43.2800
686 CA PHE 152 0.0101 39.9932 41.2900
697 CA THR 153 0.0094 39.8457 41.2400
704 CA SER 154 0.0087 39.7081 41.4100
710 CA ILE 155 0.0096 39.8897 40.3300
718 CA PHE 156 0.0099 39.9549 42.1300
729 CA THR 157 0.0086 39.6857 43.7400
736 CA LEU 158 0.0086 39.6867 41.5100
744 CA CYS 159 0.0109 40.1711 40.4100
750 CA THR 160 0.0105 40.0938 43.7800
757 CA MET 161 0.0098 39.9455 41.2500
765 CA SER 162 0.0114 40.2635 38.6000
771 CA VAL 163 0.0142 40.8416 40.0600
778 CA ASP 164 0.0139 40.7912 41.0200
786 CA ARG 165 0.0143 40.8760 38.5700
797 CA TYR 166 0.0172 41.4762 35.3100
809 CA ILE 167 0.0257 43.2416 35.6600
817 CA ALA 168 0.0304 44.2052 35.4800
822 CA VAL 169 0.0345 45.0477 34.0000
829 CA CYS 170 0.0368 45.5432 34.9300
835 CA HIS 171 0.0637 51.1159 33.9800
845 CA PRO 172 0.0786 54.1847 32.8400
852 CA VAL 173 0.1438 67.7100 33.1800
859 CA LYS 174 0.0983 58.2696 34.8000
868 CA ALA 175 0.0550 49.3069 36.5400
873 CA LEU 176 0.1055 59.7750 37.3100
881 CA ASP 177 0.0968 57.9617 39.0600
889 CA PHE 178 0.0560 49.5048 39.7900
900 CA ARG 179 0.0268 43.4510 42.7100
911 CA THR 180 0.0368 45.5396 49.1700
918 CA PRO 181 0.0348 45.1190 51.1600
925 CA ARG 182 0.0483 47.9123 52.6500
936 CA ASN 183 0.0310 44.3325 51.3700
944 CA ALA 184 0.0198 42.0150 49.9500
949 CA LYS 185 0.0257 43.2265 51.0000
958 CA ILE 186 0.0339 44.9333 51.4800
966 CA VAL 187 0.0221 42.4847 50.6600
973 CA ASN 188 0.0169 41.4113 50.3600
981 CA VAL 189 0.0260 43.3023 50.0600
988 CA CYS 190 0.0283 43.7629 49.9800
994 CA ASN 191 0.0157 41.1714 48.1100
1002 CA TRP 192 0.0155 41.1289 46.4500
1016 CA ILE 193 0.0290 43.9079 47.2200
1024 CA LEU 194 0.0274 43.5840 48.0800
1032 CA SER 195 0.0163 41.2842 46.9200
1038 CA SER 196 0.0203 42.1161 48.3200
1044 CA ALA 197 0.0254 43.1791 50.4300
1049 CA ILE 198 0.0204 42.1263 47.1700
1057 CA GLY 199 0.0176 41.5581 44.6000
1061 CA LEU 200 0.0255 43.2014 45.2000
1069 CA PRO 201 0.0278 43.6637 43.3400
1076 CA VAL 202 0.0176 41.5637 42.7400
1083 CA MET 203 0.0203 42.1075 40.7500
1091 CA PHE 204 0.0327 44.6882 43.4900
1102 CA MET 205 0.0233 42.7380 40.5100
1110 CA ALA 206 0.0215 42.3714 40.7800
1115 CA THR 207 0.0294 44.0088 38.1200
1122 CA THR 208 0.0333 44.8177 34.6900
1129 CA LYS 209 0.0601 50.3643 37.0500
1138 CA TYR 210 0.0711 52.6495 40.6400
1150 CA ARG 211 0.1315 65.1626 41.8000
1161 CA GLN 212 0.2426 88.1642 44.5600
1170 CA GLY 213 0.1672 72.5463 43.6000
1174 CA SER 214 0.0822 54.9464 41.9800
1180 CA ILE 215 0.0476 47.7659 39.0700
1188 CA ASP 216 0.0359 45.3385 36.8500
1196 CA CYS 217 0.0234 42.7571 37.6700
1202 CA THR 218 0.0295 44.0238 37.0600
1209 CA LEU 219 0.0270 43.5096 37.6500
1217 CA THR 220 0.0378 45.7394 39.5700
1224 CA PHE 221 0.0457 47.3736 43.2700
1235 CA SER 222 0.0730 53.0425 47.7500
1241 CA HIS 223 0.1395 66.8174 51.4000
1251 CA PRO 224 0.1236 63.5145 51.7600
1258 CA THR 225 0.0957 57.7440 48.3700
1265 CA TRP 226 0.0847 55.4649 47.5200
1279 CA TYR 227 0.0685 52.1100 45.0900
1291 CA TRP 228 0.0480 47.8444 43.5800
1305 CA GLU 229 0.0296 44.0512 39.0800
1314 CA ASN 230 0.0422 46.6575 37.9700
1322 CA LEU 231 0.0386 45.8982 36.7800
1330 CA LEU 232 0.0242 42.9173 34.6100
1338 CA LYS 233 0.0224 42.5532 34.5800
1347 CA ILE 234 0.0248 43.0477 35.6300
1355 CA CYS 235 0.0236 42.8072 36.0300
1361 CA VAL 236 0.0179 41.6125 35.9100
1368 CA PHE 237 0.0170 41.4394 36.7200
1379 CA ILE 238 0.0224 42.5503 39.0500
1387 CA PHE 239 0.0204 42.1367 38.9900
1398 CA ALA 240 0.0146 40.9250 35.9500
1403 CA PHE 241 0.0151 41.0344 37.2500
1414 CA ILE 242 0.0189 41.8149 37.9400
1422 CA MET 243 0.0217 42.4065 37.4700
1430 CA PRO 244 0.0161 41.2423 37.0700
1437 CA VAL 245 0.0170 41.4341 37.0900
1444 CA LEU 246 0.0259 43.2710 36.8200
1452 CA ILE 247 0.0188 41.8074 35.9300
1460 CA ILE 248 0.0143 40.8790 37.1900
1468 CA THR 249 0.0216 42.3786 36.9900
1475 CA VAL 250 0.0275 43.6092 37.4300
1482 CA CYS 251 0.0173 41.4982 37.5300
1488 CA TYR 252 0.0157 41.1597 37.6400
1500 CA GLY 253 0.0283 43.7619 36.0600
1504 CA LEU 254 0.0284 43.8011 35.8100
1512 CA MET 255 0.0204 42.1269 35.2700
1520 CA ILE 256 0.0261 43.3071 34.1000
1528 CA LEU 257 0.0492 48.1061 33.8100
1536 CA ARG 258 0.0422 46.6452 34.6700
1547 CA LEU 259 0.0386 45.9159 36.2900
1555 CA LYS 260 0.0558 49.4759 36.8400
1564 CA SER 261 0.0881 56.1709 36.9900
1570 CA VAL 262 0.0955 57.6870 38.1000
1577 CA ARG 263 0.1919 77.6758 40.3300
1588 CA MET 264 0.1717 73.4859 44.1000
1596 CA LEU 265 0.0833 55.1758 45.4600
1604 CA SER 266 0.1020 59.0354 50.6200
1610 CA GLY 267 0.1737 73.9028 51.3600
1614 CA SER 268 0.2121 81.8591 49.2200
1620 CA LYS 269 0.1990 79.1322 49.8800
1629 CA GLU 270 0.1878 76.8165 48.8700
1638 CA LYS 271 0.1219 63.1627 48.2800
1647 CA ASP 272 0.0944 57.4742 49.7300
1655 CA ARG 273 0.0983 58.2858 49.6400
1666 CA ASN 274 0.0769 53.8400 49.1100
1674 CA LEU 275 0.0441 47.0505 45.8200
1682 CA ARG 276 0.0553 49.3637 48.1900
1693 CA ARG 277 0.0459 47.4143 48.7200
1704 CA ILE 278 0.0356 45.2923 45.6100
1712 CA THR 279 0.0336 44.8627 45.5100
1719 CA ARG 280 0.0446 47.1467 45.6300
1730 CA MET 281 0.0267 43.4446 46.4200
1738 CA VAL 282 0.0229 42.6505 43.0500
1745 CA LEU 283 0.0290 43.9265 44.5200
1753 CA VAL 284 0.0245 42.9923 42.6300
1760 CA VAL 285 0.0161 41.2536 42.2900
1767 CA VAL 286 0.0163 41.2898 40.9600
1774 CA ALA 287 0.0199 42.0407 41.7800
1779 CA VAL 288 0.0162 41.2550 40.2300
1786 CA PHE 289 0.0139 40.7809 38.8000
1797 CA ILE 290 0.0159 41.2126 38.3500
1805 CA VAL 291 0.0185 41.7459 40.4400
1812 CA CYS 292 0.0137 40.7531 41.4600
1818 CA TRP 293 0.0125 40.4923 41.5600
1832 CA THR 294 0.0166 41.3497 40.1600
1839 CA PRO 295 0.0162 41.2733 39.7700
1846 CA ILE 296 0.0133 40.6738 37.8000
1854 CA HIS 297 0.0160 41.2228 37.8400
1864 CA ILE 298 0.0224 42.5479 38.6600
1872 CA TYR 299 0.0223 42.5382 40.0200
1884 CA VAL 300 0.0230 42.6722 39.3300
1891 CA ILE 301 0.0276 43.6303 38.6500
1899 CA ILE 302 0.0372 45.6132 39.5100
1907 CA LYS 303 0.0387 45.9221 37.0100
1916 CA ALA 304 0.0532 48.9295 39.3800
1921 CA LEU 305 0.1058 59.8214 41.1500
1929 CA ILE 306 0.1161 61.9664 43.3500
1937 CA THR 307 0.1568 70.3926 42.7600
1944 CA ILE 308 0.1176 62.2837 45.7600
1952 CA PRO 309 0.2110 81.6263 50.1000
1959 CA GLU 310 0.1730 73.7500 52.8700
1968 CA THR 311 0.1514 69.2827 50.2200
1975 CA THR 312 0.1322 65.3070 49.0600
1982 CA PHE 313 0.1159 61.9223 44.8600
1993 CA GLN 314 0.0635 51.0632 40.0400
2002 CA THR 315 0.0352 45.2114 39.9000
2009 CA VAL 316 0.0358 45.3224 39.6100
2016 CA SER 317 0.0331 44.7683 42.5800
2022 CA TRP 318 0.0228 42.6393 40.0500
2036 CA HIS 319 0.0164 41.3004 40.8600
2046 CA PHE 320 0.0219 42.4493 42.9500
2057 CA CYS 321 0.0164 41.3083 42.5000
2063 CA ILE 322 0.0131 40.6188 42.0000
2071 CA ALA 323 0.0145 40.9150 46.8800
2076 CA LEU 324 0.0146 40.9334 45.5100
2084 CA GLY 325 0.0119 40.3662 44.6900
2088 CA TYR 326 0.0106 40.1122 46.2400
2100 CA THR 327 0.0124 40.4800 49.2600
2107 CA ASN 328 0.0110 40.1832 49.0200
2115 CA SER 329 0.0108 40.1529 52.0600
2121 CA CYS 330 0.0118 40.3544 51.9300
2127 CA LEU 331 0.0127 40.5339 51.2600
2135 CA ASN 332 0.0109 40.1660 51.3600
2143 CA PRO 333 0.0130 40.5952 57.2200
2150 CA VAL 334 0.0183 41.6970 57.8600
2157 CA LEU 335 0.0133 40.6718 54.2500
2165 CA TYR 336 0.0138 40.7704 53.4800
2177 CA ALA 337 0.0194 41.9330 61.9300
2182 CA PHE 338 0.0255 43.1975 61.1600
2193 CA LEU 339 0.0280 43.7101 58.8800
2201 CA ASP 340 0.0381 45.8093 61.0400
2209 CA GLU 341 0.0693 52.2729 61.5500
2218 CA ASN 342 0.0448 47.1882 65.1800
2226 CA PHE 343 0.0474 47.7363 67.9000
2237 CA LYS 344 0.0995 58.5243 70.9400
2246 CA ARG 345 0.1230 63.3982 67.7500

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.

Should you encounter any unexpected behaviour, please let us know.