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***  MEMBRANE PROTEIN 10-MAY-18 6DDF  ***

B-factor analysis for ID 220323001940131206

Overall B-factor prediction

Correlation= 0.008 for 281 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   MET     65      0.3566    111.7898     45.2600
    10 CA   VAL     66      0.1803     75.2589     44.2800
    17 CA   THR     67      0.0762     53.7016     40.4900
    24 CA   ALA     68      0.0530     48.8951     51.2300
    29 CA   ILE     69      0.0674     51.8685     49.4400
    37 CA   THR     70      0.0718     52.7850     50.8300
    44 CA   ILE     71      0.0330     44.7445     48.3300
    52 CA   MET     72      0.0278     43.6606     54.3400
    60 CA   ALA     73      0.0505     48.3811     57.9700
    65 CA   LEU     74      0.0494     48.1400     60.6400
    73 CA   TYR     75      0.0179     41.6069     53.2900
    85 CA   SER     76      0.0185     41.7488     57.8400
    91 CA   ILE     77      0.0300     44.1166     57.7300
    99 CA   VAL     78      0.0182     41.6731     56.9200
   106 CA   CYS     79      0.0155     41.1270     57.9000
   112 CA   VAL     80      0.0254     43.1807     61.2200
   119 CA   VAL     81      0.0236     42.7913     62.0200
   126 CA   GLY     82      0.0150     41.0092     61.5100
   130 CA   LEU     83      0.0153     41.0883     64.0500
   138 CA   PHE     84      0.0267     43.4498     64.9100
   149 CA   GLY     85      0.0168     41.3909     65.2000
   153 CA   ASN     86      0.0128     40.5686     64.6600
   161 CA   PHE     87      0.0245     42.9759     67.0400
   172 CA   LEU     88      0.0231     42.7037     67.3800
   180 CA   VAL     89      0.0158     41.1741     67.9600
   187 CA   MET     90      0.0168     41.3899     66.9900
   195 CA   TYR     91      0.0337     44.8865     71.5500
   207 CA   VAL     92      0.0301     44.1439     72.8200
   214 CA   ILE     93      0.0208     42.2239     72.0900
   222 CA   VAL     94      0.0336     44.8778     74.8100
   229 CA   ARG     95      0.0510     48.4833     75.6200
   240 CA   TYR     96      0.0490     48.0648     79.0400
   252 CA   THR     97      0.0402     46.2377     77.3400
   259 CA   LYS     98      0.0543     49.1627     75.9600
   268 CA   MET     99      0.0339     44.9368     70.7300
   276 CA   LYS    100      0.0535     48.9988     66.4800
   285 CA   THR    101      0.0361     45.3924     61.2800
   292 CA   ALA    102      0.0227     42.6143     56.0300
   297 CA   THR    103      0.0174     41.5143     56.3200
   304 CA   ASN    104      0.0157     41.1598     59.7800
   312 CA   ILE    105      0.0145     40.9050     56.1000
   320 CA   TYR    106      0.0110     40.1898     50.5600
   332 CA   ILE    107      0.0105     40.0793     52.0200
   340 CA   PHE    108      0.0116     40.3027     55.2900
   351 CA   ASN    109      0.0099     39.9548     50.7600
   359 CA   LEU    110      0.0091     39.7888     51.1200
   367 CA   ALA    111      0.0106     40.0954     54.4600
   372 CA   LEU    112      0.0112     40.2390     54.6600
   380 CA   ALA    113      0.0097     39.9151     51.4700
   385 CA   ASP    114      0.0093     39.8384     54.9700
   393 CA   ALA    115      0.0106     40.1012     57.8000
   398 CA   LEU    116      0.0110     40.1936     54.2600
   406 CA   ALA    117      0.0102     40.0226     51.1500
   411 CA   THR    118      0.0102     40.0233     56.6100
   418 CA   SER    119      0.0127     40.5343     55.0500
   424 CA   THR    120      0.0109     40.1703     50.1300
   431 CA   LEU    121      0.0109     40.1711     51.8700
   439 CA   PRO    122      0.0138     40.7616     47.7000
   446 CA   PHE    123      0.0140     40.8051     44.3800
   457 CA   GLN    124      0.0123     40.4465     43.7700
   466 CA   SER    125      0.0170     41.4220     44.1600
   472 CA   VAL    126      0.0199     42.0362     38.0100
   479 CA   ASN    127      0.0205     42.1500     40.0700
   487 CA   TYR    128      0.0210     42.2629     43.4800
   499 CA   LEU    129      0.0348     45.1170     43.9200
   507 CA   MET    130      0.0462     47.4903     35.7200
   515 CA   GLY    131      0.0486     47.9806     38.0800
   519 CA   THR    132      0.0385     45.8755     38.2500
   526 CA   TRP    133      0.0252     43.1233     40.7300
   540 CA   PRO    134      0.0359     45.3376     38.9700
   547 CA   PHE    135      0.0332     44.7873     42.4200
   558 CA   GLY    136      0.0425     46.7181     43.6500
   562 CA   ASN    137      0.0404     46.2855     44.6800
   570 CA   ILE    138      0.0618     50.7161     47.0700
   578 CA   LEU    139      0.0301     44.1546     45.6000
   586 CA   CYS    140      0.0199     42.0387     46.9800
   592 CA   LYS    141      0.0203     42.1066     44.9600
   601 CA   ILE    142      0.0256     43.2139     45.2400
   609 CA   VAL    143      0.0153     41.0844     44.6000
   616 CA   ILE    144      0.0136     40.7274     41.2900
   624 CA   SER    145      0.0138     40.7610     42.0600
   630 CA   ILE    146      0.0131     40.6134     43.1900
   638 CA   ASP    147      0.0108     40.1561     40.8300
   646 CA   TYR    148      0.0108     40.1428     39.7200
   658 CA   TYR    149      0.0112     40.2246     42.3200
   670 CA   ASN    150      0.0108     40.1386     42.8800
   678 CA   MET    151      0.0097     39.9142     43.2800
   686 CA   PHE    152      0.0101     39.9932     41.2900
   697 CA   THR    153      0.0094     39.8457     41.2400
   704 CA   SER    154      0.0087     39.7081     41.4100
   710 CA   ILE    155      0.0096     39.8897     40.3300
   718 CA   PHE    156      0.0099     39.9549     42.1300
   729 CA   THR    157      0.0086     39.6857     43.7400
   736 CA   LEU    158      0.0086     39.6867     41.5100
   744 CA   CYS    159      0.0109     40.1711     40.4100
   750 CA   THR    160      0.0105     40.0938     43.7800
   757 CA   MET    161      0.0098     39.9455     41.2500
   765 CA   SER    162      0.0114     40.2635     38.6000
   771 CA   VAL    163      0.0142     40.8416     40.0600
   778 CA   ASP    164      0.0139     40.7912     41.0200
   786 CA   ARG    165      0.0143     40.8760     38.5700
   797 CA   TYR    166      0.0172     41.4762     35.3100
   809 CA   ILE    167      0.0257     43.2416     35.6600
   817 CA   ALA    168      0.0304     44.2052     35.4800
   822 CA   VAL    169      0.0345     45.0477     34.0000
   829 CA   CYS    170      0.0368     45.5432     34.9300
   835 CA   HIS    171      0.0637     51.1159     33.9800
   845 CA   PRO    172      0.0786     54.1847     32.8400
   852 CA   VAL    173      0.1438     67.7100     33.1800
   859 CA   LYS    174      0.0983     58.2696     34.8000
   868 CA   ALA    175      0.0550     49.3069     36.5400
   873 CA   LEU    176      0.1055     59.7750     37.3100
   881 CA   ASP    177      0.0968     57.9617     39.0600
   889 CA   PHE    178      0.0560     49.5048     39.7900
   900 CA   ARG    179      0.0268     43.4510     42.7100
   911 CA   THR    180      0.0368     45.5396     49.1700
   918 CA   PRO    181      0.0348     45.1190     51.1600
   925 CA   ARG    182      0.0483     47.9123     52.6500
   936 CA   ASN    183      0.0310     44.3325     51.3700
   944 CA   ALA    184      0.0198     42.0150     49.9500
   949 CA   LYS    185      0.0257     43.2265     51.0000
   958 CA   ILE    186      0.0339     44.9333     51.4800
   966 CA   VAL    187      0.0221     42.4847     50.6600
   973 CA   ASN    188      0.0169     41.4113     50.3600
   981 CA   VAL    189      0.0260     43.3023     50.0600
   988 CA   CYS    190      0.0283     43.7629     49.9800
   994 CA   ASN    191      0.0157     41.1714     48.1100
  1002 CA   TRP    192      0.0155     41.1289     46.4500
  1016 CA   ILE    193      0.0290     43.9079     47.2200
  1024 CA   LEU    194      0.0274     43.5840     48.0800
  1032 CA   SER    195      0.0163     41.2842     46.9200
  1038 CA   SER    196      0.0203     42.1161     48.3200
  1044 CA   ALA    197      0.0254     43.1791     50.4300
  1049 CA   ILE    198      0.0204     42.1263     47.1700
  1057 CA   GLY    199      0.0176     41.5581     44.6000
  1061 CA   LEU    200      0.0255     43.2014     45.2000
  1069 CA   PRO    201      0.0278     43.6637     43.3400
  1076 CA   VAL    202      0.0176     41.5637     42.7400
  1083 CA   MET    203      0.0203     42.1075     40.7500
  1091 CA   PHE    204      0.0327     44.6882     43.4900
  1102 CA   MET    205      0.0233     42.7380     40.5100
  1110 CA   ALA    206      0.0215     42.3714     40.7800
  1115 CA   THR    207      0.0294     44.0088     38.1200
  1122 CA   THR    208      0.0333     44.8177     34.6900
  1129 CA   LYS    209      0.0601     50.3643     37.0500
  1138 CA   TYR    210      0.0711     52.6495     40.6400
  1150 CA   ARG    211      0.1315     65.1626     41.8000
  1161 CA   GLN    212      0.2426     88.1642     44.5600
  1170 CA   GLY    213      0.1672     72.5463     43.6000
  1174 CA   SER    214      0.0822     54.9464     41.9800
  1180 CA   ILE    215      0.0476     47.7659     39.0700
  1188 CA   ASP    216      0.0359     45.3385     36.8500
  1196 CA   CYS    217      0.0234     42.7571     37.6700
  1202 CA   THR    218      0.0295     44.0238     37.0600
  1209 CA   LEU    219      0.0270     43.5096     37.6500
  1217 CA   THR    220      0.0378     45.7394     39.5700
  1224 CA   PHE    221      0.0457     47.3736     43.2700
  1235 CA   SER    222      0.0730     53.0425     47.7500
  1241 CA   HIS    223      0.1395     66.8174     51.4000
  1251 CA   PRO    224      0.1236     63.5145     51.7600
  1258 CA   THR    225      0.0957     57.7440     48.3700
  1265 CA   TRP    226      0.0847     55.4649     47.5200
  1279 CA   TYR    227      0.0685     52.1100     45.0900
  1291 CA   TRP    228      0.0480     47.8444     43.5800
  1305 CA   GLU    229      0.0296     44.0512     39.0800
  1314 CA   ASN    230      0.0422     46.6575     37.9700
  1322 CA   LEU    231      0.0386     45.8982     36.7800
  1330 CA   LEU    232      0.0242     42.9173     34.6100
  1338 CA   LYS    233      0.0224     42.5532     34.5800
  1347 CA   ILE    234      0.0248     43.0477     35.6300
  1355 CA   CYS    235      0.0236     42.8072     36.0300
  1361 CA   VAL    236      0.0179     41.6125     35.9100
  1368 CA   PHE    237      0.0170     41.4394     36.7200
  1379 CA   ILE    238      0.0224     42.5503     39.0500
  1387 CA   PHE    239      0.0204     42.1367     38.9900
  1398 CA   ALA    240      0.0146     40.9250     35.9500
  1403 CA   PHE    241      0.0151     41.0344     37.2500
  1414 CA   ILE    242      0.0189     41.8149     37.9400
  1422 CA   MET    243      0.0217     42.4065     37.4700
  1430 CA   PRO    244      0.0161     41.2423     37.0700
  1437 CA   VAL    245      0.0170     41.4341     37.0900
  1444 CA   LEU    246      0.0259     43.2710     36.8200
  1452 CA   ILE    247      0.0188     41.8074     35.9300
  1460 CA   ILE    248      0.0143     40.8790     37.1900
  1468 CA   THR    249      0.0216     42.3786     36.9900
  1475 CA   VAL    250      0.0275     43.6092     37.4300
  1482 CA   CYS    251      0.0173     41.4982     37.5300
  1488 CA   TYR    252      0.0157     41.1597     37.6400
  1500 CA   GLY    253      0.0283     43.7619     36.0600
  1504 CA   LEU    254      0.0284     43.8011     35.8100
  1512 CA   MET    255      0.0204     42.1269     35.2700
  1520 CA   ILE    256      0.0261     43.3071     34.1000
  1528 CA   LEU    257      0.0492     48.1061     33.8100
  1536 CA   ARG    258      0.0422     46.6452     34.6700
  1547 CA   LEU    259      0.0386     45.9159     36.2900
  1555 CA   LYS    260      0.0558     49.4759     36.8400
  1564 CA   SER    261      0.0881     56.1709     36.9900
  1570 CA   VAL    262      0.0955     57.6870     38.1000
  1577 CA   ARG    263      0.1919     77.6758     40.3300
  1588 CA   MET    264      0.1717     73.4859     44.1000
  1596 CA   LEU    265      0.0833     55.1758     45.4600
  1604 CA   SER    266      0.1020     59.0354     50.6200
  1610 CA   GLY    267      0.1737     73.9028     51.3600
  1614 CA   SER    268      0.2121     81.8591     49.2200
  1620 CA   LYS    269      0.1990     79.1322     49.8800
  1629 CA   GLU    270      0.1878     76.8165     48.8700
  1638 CA   LYS    271      0.1219     63.1627     48.2800
  1647 CA   ASP    272      0.0944     57.4742     49.7300
  1655 CA   ARG    273      0.0983     58.2858     49.6400
  1666 CA   ASN    274      0.0769     53.8400     49.1100
  1674 CA   LEU    275      0.0441     47.0505     45.8200
  1682 CA   ARG    276      0.0553     49.3637     48.1900
  1693 CA   ARG    277      0.0459     47.4143     48.7200
  1704 CA   ILE    278      0.0356     45.2923     45.6100
  1712 CA   THR    279      0.0336     44.8627     45.5100
  1719 CA   ARG    280      0.0446     47.1467     45.6300
  1730 CA   MET    281      0.0267     43.4446     46.4200
  1738 CA   VAL    282      0.0229     42.6505     43.0500
  1745 CA   LEU    283      0.0290     43.9265     44.5200
  1753 CA   VAL    284      0.0245     42.9923     42.6300
  1760 CA   VAL    285      0.0161     41.2536     42.2900
  1767 CA   VAL    286      0.0163     41.2898     40.9600
  1774 CA   ALA    287      0.0199     42.0407     41.7800
  1779 CA   VAL    288      0.0162     41.2550     40.2300
  1786 CA   PHE    289      0.0139     40.7809     38.8000
  1797 CA   ILE    290      0.0159     41.2126     38.3500
  1805 CA   VAL    291      0.0185     41.7459     40.4400
  1812 CA   CYS    292      0.0137     40.7531     41.4600
  1818 CA   TRP    293      0.0125     40.4923     41.5600
  1832 CA   THR    294      0.0166     41.3497     40.1600
  1839 CA   PRO    295      0.0162     41.2733     39.7700
  1846 CA   ILE    296      0.0133     40.6738     37.8000
  1854 CA   HIS    297      0.0160     41.2228     37.8400
  1864 CA   ILE    298      0.0224     42.5479     38.6600
  1872 CA   TYR    299      0.0223     42.5382     40.0200
  1884 CA   VAL    300      0.0230     42.6722     39.3300
  1891 CA   ILE    301      0.0276     43.6303     38.6500
  1899 CA   ILE    302      0.0372     45.6132     39.5100
  1907 CA   LYS    303      0.0387     45.9221     37.0100
  1916 CA   ALA    304      0.0532     48.9295     39.3800
  1921 CA   LEU    305      0.1058     59.8214     41.1500
  1929 CA   ILE    306      0.1161     61.9664     43.3500
  1937 CA   THR    307      0.1568     70.3926     42.7600
  1944 CA   ILE    308      0.1176     62.2837     45.7600
  1952 CA   PRO    309      0.2110     81.6263     50.1000
  1959 CA   GLU    310      0.1730     73.7500     52.8700
  1968 CA   THR    311      0.1514     69.2827     50.2200
  1975 CA   THR    312      0.1322     65.3070     49.0600
  1982 CA   PHE    313      0.1159     61.9223     44.8600
  1993 CA   GLN    314      0.0635     51.0632     40.0400
  2002 CA   THR    315      0.0352     45.2114     39.9000
  2009 CA   VAL    316      0.0358     45.3224     39.6100
  2016 CA   SER    317      0.0331     44.7683     42.5800
  2022 CA   TRP    318      0.0228     42.6393     40.0500
  2036 CA   HIS    319      0.0164     41.3004     40.8600
  2046 CA   PHE    320      0.0219     42.4493     42.9500
  2057 CA   CYS    321      0.0164     41.3083     42.5000
  2063 CA   ILE    322      0.0131     40.6188     42.0000
  2071 CA   ALA    323      0.0145     40.9150     46.8800
  2076 CA   LEU    324      0.0146     40.9334     45.5100
  2084 CA   GLY    325      0.0119     40.3662     44.6900
  2088 CA   TYR    326      0.0106     40.1122     46.2400
  2100 CA   THR    327      0.0124     40.4800     49.2600
  2107 CA   ASN    328      0.0110     40.1832     49.0200
  2115 CA   SER    329      0.0108     40.1529     52.0600
  2121 CA   CYS    330      0.0118     40.3544     51.9300
  2127 CA   LEU    331      0.0127     40.5339     51.2600
  2135 CA   ASN    332      0.0109     40.1660     51.3600
  2143 CA   PRO    333      0.0130     40.5952     57.2200
  2150 CA   VAL    334      0.0183     41.6970     57.8600
  2157 CA   LEU    335      0.0133     40.6718     54.2500
  2165 CA   TYR    336      0.0138     40.7704     53.4800
  2177 CA   ALA    337      0.0194     41.9330     61.9300
  2182 CA   PHE    338      0.0255     43.1975     61.1600
  2193 CA   LEU    339      0.0280     43.7101     58.8800
  2201 CA   ASP    340      0.0381     45.8093     61.0400
  2209 CA   GLU    341      0.0693     52.2729     61.5500
  2218 CA   ASN    342      0.0448     47.1882     65.1800
  2226 CA   PHE    343      0.0474     47.7363     67.9000
  2237 CA   LYS    344      0.0995     58.5243     70.9400
  2246 CA   ARG    345      0.1230     63.3982     67.7500

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.