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***  2cm5  ***

B-factor analysis for ID 21083121482279288

Overall B-factor prediction

Correlation= 0.464 for 141 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   ALA    525      0.5978     63.1637     16.6000
     7 CA   LEU    526      0.3671     43.1930     19.1700
    15 CA   TYR    527      0.1791     26.9127     27.0300
    27 CA   GLU    528      0.0962     19.7352     25.2800
    36 CA   GLU    529      0.0401     14.8799     20.8100
    45 CA   GLU    530      0.0661     17.1307     37.8200
    54 CA   ILE    538      0.2831     35.9162     42.2300
    59 CA   GLU    539      0.1698     26.1070     29.8300
    68 CA   GLU    540      0.0470     15.4760     22.0400
    77 CA   ARG    541      0.0206     13.1849     13.9600
    88 CA   GLY    542      0.0171     12.8856     13.6200
    92 CA   LYS    543      0.0147     12.6725     11.3400
   101 CA   ILE    544      0.0113     12.3859      8.5700
   109 CA   LEU    545      0.0130     12.5278      7.1200
   117 CA   VAL    546      0.0105     12.3152      8.5800
   124 CA   SER    547      0.0129     12.5163      8.4500
   130 CA   LEU    548      0.0086     12.1464      9.0500
   138 CA   TYR    550      0.0169     12.8706     12.3700
   150 CA   SER    551      0.0341     14.3542     14.8200
   156 CA   THR    552      0.0586     16.4803     19.2900
   163 CA   GLN    553      0.1755     26.6002     26.3000
   168 CA   GLN    554      0.0708     17.5323     22.1300
   177 CA   GLY    555      0.0377     14.6683     18.5600
   181 CA   GLY    556      0.0200     13.1383     13.9800
   185 CA   LEU    557      0.0107     12.3323     10.3600
   193 CA   ILE    558      0.0141     12.6239     10.1300
   201 CA   VAL    559      0.0109     12.3451      9.5500
   208 CA   GLY    560      0.0135     12.5714     11.0100
   212 CA   ILE    561      0.0117     12.4191      9.1300
   220 CA   ILE    562      0.0145     12.6547      9.5800
   228 CA   ARG    563      0.0136     12.5804     10.6500
   239 CA   CYS    564      0.0126     12.4950     10.5800
   245 CA   VAL    565      0.0163     12.8180     10.7000
   252 CA   HIS    566      0.0228     13.3816     13.4800
   262 CA   LEU    567      0.0140     12.6174     12.2500
   270 CA   ALA    568      0.0203     13.1582     15.5900
   275 CA   ALA    569      0.0268     13.7198     17.3000
   280 CA   ASP    571      0.0316     14.1364     21.1100
   288 CA   ALA    572      0.1014     20.1870     26.7400
   293 CA   ASN    573      0.0914     19.3193     29.6700
   301 CA   GLY    574      0.0678     17.2738     26.2600
   305 CA   TYR    575      0.0263     13.6826     22.5500
   317 CA   SER    576      0.0133     12.5522     13.8900
   323 CA   ASP    577      0.0138     12.6026     10.7100
   331 CA   PRO    578      0.0112     12.3699     10.1400
   338 CA   PHE    579      0.0139     12.6060      8.8600
   349 CA   VAL    580      0.0136     12.5771      9.9500
   356 CA   LYS    581      0.0171     12.8816     10.6100
   362 CA   LEU    582      0.0145     12.6577     11.1400
   370 CA   TRP    583      0.0203     13.1626     11.0300
   384 CA   LEU    584      0.0159     12.7773     12.6600
   392 CA   LYS    585      0.0267     13.7186     19.6300
   401 CA   PRO    586      0.0652     17.0469     22.1300
   408 CA   ASP    587      0.0829     18.5801     27.3700
   412 CA   LYS    591      0.2165     30.1537     25.6700
   416 CA   ALA    592      0.0370     14.6030     17.4100
   421 CA   LYS    593      0.0316     14.1437     14.0100
   430 CA   HIS    594      0.0223     13.3304     12.0200
   440 CA   LYS    595      0.0211     13.2300     13.6200
   446 CA   THR    596      0.0183     12.9900     11.0100
   453 CA   GLN    597      0.0246     13.5305     13.4500
   462 CA   ILE    598      0.0199     13.1242     11.9400
   470 CA   LYS    599      0.0181     12.9677     13.3300
   479 CA   LYS    600      0.0401     14.8723     15.3900
   485 CA   LYS    601      0.0304     14.0362     17.3700
   490 CA   THR    602      0.0205     13.1790     14.7000
   497 CA   LEU    603      0.0176     12.9313     12.7900
   505 CA   ASN    604      0.0176     12.9259     12.6800
   513 CA   PRO    605      0.0157     12.7670     12.1400
   520 CA   GLU    606      0.0217     13.2784     14.3700
   529 CA   PHE    607      0.0165     12.8339     10.8400
   540 CA   ASN    608      0.0253     13.5933     10.5300
   548 CA   GLU    609      0.0198     13.1144     10.2600
   557 CA   GLU    610      0.0221     13.3200     10.9600
   566 CA   PHE    611      0.0164     12.8193      9.9600
   577 CA   PHE    612      0.0202     13.1515     10.5500
   588 CA   TYR    613      0.0162     12.8031     11.4000
   600 CA   ASP    614      0.0392     14.7997     14.5100
   608 CA   ILE    615      0.0251     13.5796     14.1800
   616 CA   LYS    616      0.0458     15.3680     16.2400
   625 CA   HIS    617      0.0244     13.5136     17.5800
   635 CA   SER    618      0.0446     15.2641     23.0300
   641 CA   ASP    619      0.0356     14.4834     19.3400
   649 CA   LEU    620      0.0144     12.6521     17.1200
   657 CA   ALA    621      0.0271     13.7468     20.7000
   662 CA   LYS    622      0.0353     14.4632     19.4300
   669 CA   LYS    623      0.0184     12.9940     11.8900
   678 CA   SER    624      0.0145     12.6622     11.9800
   684 CA   LEU    625      0.0105     12.3155     12.1800
   692 CA   ASP    626      0.0161     12.7950     13.2500
   700 CA   ILE    627      0.0122     12.4589     12.5100
   708 CA   SER    628      0.0162     12.8091     13.1400
   714 CA   VAL    629      0.0124     12.4748      9.5400
   721 CA   TRP    630      0.0132     12.5488     10.0100
   735 CA   ASP    631      0.0131     12.5359     11.2900
   743 CA   TYR    632      0.0192     13.0629     11.5400
   755 CA   ASP    633      0.0290     13.9152     14.0200
   763 CA   ILE    634      0.0903     19.2189     15.2000
   771 CA   GLY    635      0.1976     28.5172     15.8900
   775 CA   LYS    636      0.0741     17.8231     18.1000
   784 CA   SER    637      0.1042     20.4247     15.8500
   790 CA   ASN    638      0.0312     14.1057     15.1100
   798 CA   ASP    639      0.0253     13.5938     17.7100
   806 CA   TYR    640      0.0237     13.4532     13.9000
   818 CA   ILE    641      0.0148     12.6856     11.8400
   826 CA   GLY    642      0.0174     12.9095     12.2900
   830 CA   GLY    643      0.0191     13.0553     12.4300
   834 CA   CYS    644      0.0158     12.7696     23.3400
   840 CA   GLN    645      0.0170     12.8761     14.6800
   845 CA   LEU    646      0.0101     12.2782     13.0900
   853 CA   GLY    647      0.0126     12.4916     13.1500
   857 CA   ILE    648      0.0236     13.4441     12.7400
   865 CA   SER    649      0.0550     16.1628     26.5500
   871 CA   ALA    650      0.0337     14.3216     13.3800
   876 CA   LYS    651      0.0973     19.8313     16.3800
   885 CA   GLY    652      0.1575     25.0427     14.4400
   889 CA   GLU    653      0.0447     15.2742     13.0800
   894 CA   ARG    654      0.0166     12.8386     11.3400
   902 CA   LEU    655      0.0199     13.1299      9.5100
   910 CA   LYS    656      0.0238     13.4609     11.7600
   915 CA   HIS    657      0.0118     12.4263      8.3500
   925 CA   TRP    658      0.0099     12.2576      9.4900
   939 CA   TYR    659      0.0189     13.0374     10.5000
   951 CA   GLU    660      0.0196     13.0964     12.1300
   960 CA   CYS    661      0.0122     12.4585     15.9900
   966 CA   LEU    662      0.0178     12.9427     22.4800
   974 CA   LYS    663      0.0395     14.8207     21.3600
   982 CA   ASN    664      0.0360     14.5239     21.2100
   990 CA   LYS    665      0.0331     14.2661     18.2300
   999 CA   ASP    666      0.0531     16.0016     14.4300
  1007 CA   LYS    667      0.0455     15.3450     12.7300
  1016 CA   LYS    668      0.0351     14.4429     11.7200
  1023 CA   ILE    669      0.0173     12.9035     10.5100
  1031 CA   GLU    670      0.0168     12.8561      9.5900
  1040 CA   ARG    671      0.0154     12.7381      8.8400
  1051 CA   TRP    672      0.0159     12.7841      9.5300
  1065 CA   HIS    673      0.0144     12.6495     10.4400
  1075 CA   GLN    674      0.0219     13.2969     10.4200
  1084 CA   LEU    675      0.0171     12.8858     10.8400
  1092 CA   GLN    676      0.0310     14.0846     17.6200
  1101 CA   ASN    677      0.0802     18.3502     30.9000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.