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***  pfprmt  ***

B-factor analysis for ID 2108121251545562

Overall B-factor prediction

%Bfactors-Wn> Experimental B-factors are nearly constant !

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     5 CA   ASN      1      0.0420      0.0000      0.0000
    19 CA   GLU      2      0.0424      0.0000      0.0000
    34 CA   TYR      3      0.0158      0.0000      0.0000
    55 CA   PHE      4      0.0118      0.0000      0.0000
    75 CA   ASN      5      0.0186      0.0000      0.0000
    89 CA   SER      6      0.0197      0.0000      0.0000
   100 CA   TYR      7      0.0085      0.0000      0.0000
   121 CA   ASN      8      0.0085      0.0000      0.0000
   135 CA   TYR      9      0.0089      0.0000      0.0000
   156 CA   ILE     10      0.0153      0.0000      0.0000
   175 CA   HIE     11      0.0074      0.0000      0.0000
   192 CA   ILE     12      0.0054      0.0000      0.0000
   211 CA   HIE     13      0.0093      0.0000      0.0000
   228 CA   GLU     14      0.0121      0.0000      0.0000
   243 CA   ASP     15      0.0058      0.0000      0.0000
   255 CA   MET     16      0.0054      0.0000      0.0000
   272 CA   ILE     17      0.0128      0.0000      0.0000
   291 CA   LYS     18      0.0127      0.0000      0.0000
   313 CA   ASP     19      0.0061      0.0000      0.0000
   325 CA   GLU     20      0.0091      0.0000      0.0000
   340 CA   VAL     21      0.0053      0.0000      0.0000
   356 CA   ARG     22      0.0033      0.0000      0.0000
   380 CA   THR     23      0.0038      0.0000      0.0000
   394 CA   ARG     24      0.0058      0.0000      0.0000
   418 CA   THR     25      0.0032      0.0000      0.0000
   432 CA   TYR     26      0.0022      0.0000      0.0000
   453 CA   TYR     27      0.0034      0.0000      0.0000
   474 CA   ASP     28      0.0044      0.0000      0.0000
   486 CA   SER     29      0.0032      0.0000      0.0000
   497 CA   ILE     30      0.0029      0.0000      0.0000
   516 CA   ARG     31      0.0059      0.0000      0.0000
   540 CA   LYS     32      0.0068      0.0000      0.0000
   562 CA   ASN     33      0.0058      0.0000      0.0000
   576 CA   GLU     34      0.0066      0.0000      0.0000
   591 CA   HIE     35      0.0107      0.0000      0.0000
   608 CA   LEU     36      0.0078      0.0000      0.0000
   627 CA   ILE     37      0.0048      0.0000      0.0000
   646 CA   LYS     38      0.0094      0.0000      0.0000
   668 CA   ASP     39      0.0084      0.0000      0.0000
   680 CA   LYS     40      0.0054      0.0000      0.0000
   702 CA   ILE     41      0.0035      0.0000      0.0000
   721 CA   VAL     42      0.0022      0.0000      0.0000
   737 CA   LEU     43      0.0016      0.0000      0.0000
   756 CA   ASP     44      0.0013      0.0000      0.0000
   768 CA   VAL     45      0.0014      0.0000      0.0000
   784 CA   GLY     46      0.0018      0.0000      0.0000
   791 CA   CYS     47      0.0020      0.0000      0.0000
   802 CA   GLY     48      0.0020      0.0000      0.0000
   809 CA   THR     49      0.0020      0.0000      0.0000
   823 CA   GLY     50      0.0017      0.0000      0.0000
   830 CA   ILE     51      0.0020      0.0000      0.0000
   849 CA   LEU     52      0.0017      0.0000      0.0000
   868 CA   SER     53      0.0022      0.0000      0.0000
   879 CA   PHE     54      0.0033      0.0000      0.0000
   899 CA   PHE     55      0.0034      0.0000      0.0000
   919 CA   ALA     56      0.0026      0.0000      0.0000
   929 CA   ALA     57      0.0040      0.0000      0.0000
   939 CA   THR     58      0.0060      0.0000      0.0000
   953 CA   HIE     59      0.0054      0.0000      0.0000
   970 CA   GLY     60      0.0055      0.0000      0.0000
   977 CA   ALA     61      0.0045      0.0000      0.0000
   987 CA   LYS     62      0.0076      0.0000      0.0000
  1009 CA   HIE     63      0.0041      0.0000      0.0000
  1026 CA   VAL     64      0.0028      0.0000      0.0000
  1042 CA   TYR     65      0.0025      0.0000      0.0000
  1063 CA   SER     66      0.0023      0.0000      0.0000
  1074 CA   ILE     67      0.0027      0.0000      0.0000
  1093 CA   GLU     68      0.0034      0.0000      0.0000
  1108 CA   LYS     69      0.0064      0.0000      0.0000
  1130 CA   SER     70      0.0077      0.0000      0.0000
  1141 CA   ASP     71      0.0077      0.0000      0.0000
  1153 CA   ILE     72      0.0057      0.0000      0.0000
  1172 CA   ILE     73      0.0047      0.0000      0.0000
  1191 CA   TYR     74      0.0061      0.0000      0.0000
  1212 CA   THR     75      0.0062      0.0000      0.0000
  1226 CA   ALA     76      0.0062      0.0000      0.0000
  1236 CA   ILE     77      0.0087      0.0000      0.0000
  1255 CA   LYS     78      0.0146      0.0000      0.0000
  1277 CA   ILE     79      0.0113      0.0000      0.0000
  1296 CA   ARG     80      0.0084      0.0000      0.0000
  1320 CA   ASP     81      0.0159      0.0000      0.0000
  1332 CA   GLU     82      0.0247      0.0000      0.0000
  1347 CA   ASN     83      0.0188      0.0000      0.0000
  1361 CA   ASN     84      0.0198      0.0000      0.0000
  1375 CA   LEU     85      0.0090      0.0000      0.0000
  1394 CA   THR     86      0.0112      0.0000      0.0000
  1408 CA   ASP     87      0.0146      0.0000      0.0000
  1420 CA   LYS     88      0.0078      0.0000      0.0000
  1442 CA   VAL     89      0.0042      0.0000      0.0000
  1458 CA   THR     90      0.0044      0.0000      0.0000
  1472 CA   PHE     91      0.0039      0.0000      0.0000
  1492 CA   LEU     92      0.0045      0.0000      0.0000
  1511 CA   LYS     93      0.0056      0.0000      0.0000
  1533 CA   GLY     94      0.0062      0.0000      0.0000
  1540 CA   LEU     95      0.0058      0.0000      0.0000
  1559 CA   ALA     96      0.0045      0.0000      0.0000
  1569 CA   GLU     97      0.0099      0.0000      0.0000
  1584 CA   GLU     98      0.0136      0.0000      0.0000
  1599 CA   ILE     99      0.0076      0.0000      0.0000
  1618 CA   GLU    100      0.0083      0.0000      0.0000
  1633 CA   LEU    101      0.0055      0.0000      0.0000
  1660 CA   PRO    102      0.0075      0.0000      0.0000
  1666 CA   VAL    103      0.0083      0.0000      0.0000
  1682 CA   ASP    104      0.0125      0.0000      0.0000
  1694 CA   LYS    105      0.0063      0.0000      0.0000
  1716 CA   VAL    106      0.0041      0.0000      0.0000
  1732 CA   ASP    107      0.0038      0.0000      0.0000
  1744 CA   ILE    108      0.0025      0.0000      0.0000
  1763 CA   ILE    109      0.0014      0.0000      0.0000
  1782 CA   ILE    110      0.0012      0.0000      0.0000
  1801 CA   SER    111      0.0012      0.0000      0.0000
  1812 CA   GLU    112      0.0015      0.0000      0.0000
  1827 CA   TRP    113      0.0018      0.0000      0.0000
  1851 CA   MET    114      0.0020      0.0000      0.0000
  1868 CA   GLY    115      0.0028      0.0000      0.0000
  1875 CA   TYR    116      0.0030      0.0000      0.0000
  1896 CA   CYS    117      0.0025      0.0000      0.0000
  1907 CA   LEU    118      0.0023      0.0000      0.0000
  1926 CA   LEU    119      0.0026      0.0000      0.0000
  1945 CA   TYR    120      0.0030      0.0000      0.0000
  1966 CA   GLU    121      0.0030      0.0000      0.0000
  1981 CA   ASN    122      0.0026      0.0000      0.0000
  1995 CA   MET    123      0.0026      0.0000      0.0000
  2012 CA   LEU    124      0.0023      0.0000      0.0000
  2031 CA   ASP    125      0.0034      0.0000      0.0000
  2043 CA   THR    126      0.0028      0.0000      0.0000
  2057 CA   VAL    127      0.0020      0.0000      0.0000
  2073 CA   LEU    128      0.0026      0.0000      0.0000
  2092 CA   TYR    129      0.0041      0.0000      0.0000
  2113 CA   CYS    130      0.0027      0.0000      0.0000
  2124 CA   ARG    131      0.0029      0.0000      0.0000
  2148 CA   ASP    132      0.0044      0.0000      0.0000
  2160 CA   LYS    133      0.0056      0.0000      0.0000
  2182 CA   TRP    134      0.0043      0.0000      0.0000
  2206 CA   LEU    135      0.0042      0.0000      0.0000
  2225 CA   LYS    136      0.0076      0.0000      0.0000
  2247 CA   GLU    137      0.0337      0.0000      0.0000
  2262 CA   GLY    138      0.0395      0.0000      0.0000
  2269 CA   GLY    139      0.0047      0.0000      0.0000
  2276 CA   LEU    140      0.0034      0.0000      0.0000
  2295 CA   ILE    141      0.0018      0.0000      0.0000
  2314 CA   PHE    142      0.0017      0.0000      0.0000
  2342 CA   PRO    143      0.0019      0.0000      0.0000
  2348 CA   ASP    144      0.0025      0.0000      0.0000
  2360 CA   LYS    145      0.0029      0.0000      0.0000
  2382 CA   ALA    146      0.0028      0.0000      0.0000
  2392 CA   HIE    147      0.0031      0.0000      0.0000
  2409 CA   MET    148      0.0028      0.0000      0.0000
  2426 CA   TYR    149      0.0025      0.0000      0.0000
  2447 CA   ILE    150      0.0021      0.0000      0.0000
  2466 CA   ALA    151      0.0023      0.0000      0.0000
  2476 CA   GLY    152      0.0019      0.0000      0.0000
  2483 CA   ILE    153      0.0023      0.0000      0.0000
  2502 CA   GLU    154      0.0030      0.0000      0.0000
  2517 CA   ASP    155      0.0049      0.0000      0.0000
  2529 CA   SER    156      0.0098      0.0000      0.0000
  2540 CA   LEU    157      0.0098      0.0000      0.0000
  2559 CA   TYR    158      0.0061      0.0000      0.0000
  2580 CA   ARG    159      0.0054      0.0000      0.0000
  2604 CA   GLU    160      0.0086      0.0000      0.0000
  2619 CA   GLU    161      0.0139      0.0000      0.0000
  2634 CA   LYS    162      0.0114      0.0000      0.0000
  2656 CA   PHE    163      0.0116      0.0000      0.0000
  2676 CA   ASP    164      0.0202      0.0000      0.0000
  2688 CA   PHE    165      0.0251      0.0000      0.0000
  2708 CA   TRP    166      0.0214      0.0000      0.0000
  2732 CA   LYS    167      0.0308      0.0000      0.0000
  2754 CA   ASN    168      0.0443      0.0000      0.0000
  2768 CA   CYS    169      0.0718      0.0000      0.0000
  2779 CA   TYR    170      0.0504      0.0000      0.0000
  2800 CA   ASP    171      0.0688      0.0000      0.0000
  2812 CA   LEU    172      0.0479      0.0000      0.0000
  2831 CA   ASN    173      0.0407      0.0000      0.0000
  2845 CA   PHE    174      0.0253      0.0000      0.0000
  2865 CA   SER    175      0.0300      0.0000      0.0000
  2876 CA   SER    176      0.0342      0.0000      0.0000
  2887 CA   VAL    177      0.0192      0.0000      0.0000
  2903 CA   LEU    178      0.0129      0.0000      0.0000
  2930 CA   PRO    179      0.0177      0.0000      0.0000
  2936 CA   ILE    180      0.0188      0.0000      0.0000
  2955 CA   ILE    181      0.0066      0.0000      0.0000
  2974 CA   LYS    182      0.0053      0.0000      0.0000
  2996 CA   GLU    183      0.0044      0.0000      0.0000
  3011 CA   GLU    184      0.0044      0.0000      0.0000
  3026 CA   VAL    185      0.0027      0.0000      0.0000
  3042 CA   VAL    186      0.0028      0.0000      0.0000
  3058 CA   ILE    187      0.0030      0.0000      0.0000
  3077 CA   ASP    188      0.0039      0.0000      0.0000
  3089 CA   TYR    189      0.0045      0.0000      0.0000
  3110 CA   VAL    190      0.0039      0.0000      0.0000
  3126 CA   ASP    191      0.0078      0.0000      0.0000
  3138 CA   ARG    192      0.0069      0.0000      0.0000
  3162 CA   ASN    193      0.0091      0.0000      0.0000
  3176 CA   PHE    194      0.0054      0.0000      0.0000
  3196 CA   VAL    195      0.0037      0.0000      0.0000
  3212 CA   VAL    196      0.0036      0.0000      0.0000
  3228 CA   THR    197      0.0038      0.0000      0.0000
  3242 CA   ASP    198      0.0058      0.0000      0.0000
  3254 CA   THR    199      0.0038      0.0000      0.0000
  3268 CA   CYS    200      0.0037      0.0000      0.0000
  3279 CA   CYS    201      0.0037      0.0000      0.0000
  3290 CA   ILE    202      0.0033      0.0000      0.0000
  3309 CA   LEU    203      0.0037      0.0000      0.0000
  3328 CA   THR    204      0.0040      0.0000      0.0000
  3342 CA   LEU    205      0.0038      0.0000      0.0000
  3361 CA   ASP    206      0.0041      0.0000      0.0000
  3373 CA   LEU    207      0.0030      0.0000      0.0000
  3392 CA   ASN    208      0.0039      0.0000      0.0000
  3406 CA   THR    209      0.0077      0.0000      0.0000
  3420 CA   CYS    210      0.0053      0.0000      0.0000
  3431 CA   THR    211      0.0051      0.0000      0.0000
  3453 CA   PRO    212      0.0043      0.0000      0.0000
  3459 CA   ASP    213      0.0057      0.0000      0.0000
  3471 CA   GLN    214      0.0050      0.0000      0.0000
  3488 CA   LEU    215      0.0031      0.0000      0.0000
  3507 CA   SER    216      0.0035      0.0000      0.0000
  3518 CA   PHE    217      0.0040      0.0000      0.0000
  3538 CA   VAL    218      0.0046      0.0000      0.0000
  3554 CA   SER    219      0.0050      0.0000      0.0000
  3573 CA   PRO    220      0.0058      0.0000      0.0000
  3579 CA   PHE    221      0.0041      0.0000      0.0000
  3599 CA   GLN    222      0.0045      0.0000      0.0000
  3616 CA   LEU    223      0.0041      0.0000      0.0000
  3635 CA   LYS    224      0.0057      0.0000      0.0000
  3657 CA   MET    225      0.0051      0.0000      0.0000
  3674 CA   ILE    226      0.0076      0.0000      0.0000
  3693 CA   ARG    227      0.0094      0.0000      0.0000
  3717 CA   LYS    228      0.0109      0.0000      0.0000
  3739 CA   ASP    229      0.0075      0.0000      0.0000
  3751 CA   TYR    230      0.0051      0.0000      0.0000
  3772 CA   LEU    231      0.0025      0.0000      0.0000
  3791 CA   HIE    232      0.0024      0.0000      0.0000
  3808 CA   ALA    233      0.0016      0.0000      0.0000
  3818 CA   LEU    234      0.0016      0.0000      0.0000
  3837 CA   VAL    235      0.0018      0.0000      0.0000
  3853 CA   ILE    236      0.0019      0.0000      0.0000
  3872 CA   TRP    237      0.0021      0.0000      0.0000
  3896 CA   PHE    238      0.0025      0.0000      0.0000
  3916 CA   ASP    239      0.0027      0.0000      0.0000
  3928 CA   ILE    240      0.0024      0.0000      0.0000
  3947 CA   SER    241      0.0031      0.0000      0.0000
  3958 CA   PHE    242      0.0027      0.0000      0.0000
  3978 CA   SER    243      0.0044      0.0000      0.0000
  3989 CA   ALA    244      0.0074      0.0000      0.0000
  3999 CA   CYS    245      0.0174      0.0000      0.0000
  4010 CA   HIE    246      0.0213      0.0000      0.0000
  4027 CA   THR    247      0.0142      0.0000      0.0000
  4041 CA   GLU    248      0.0096      0.0000      0.0000
  4056 CA   VAL    249      0.0045      0.0000      0.0000
  4072 CA   ASN    250      0.0040      0.0000      0.0000
  4086 CA   PHE    251      0.0029      0.0000      0.0000
  4106 CA   THR    252      0.0030      0.0000      0.0000
  4120 CA   THR    253      0.0029      0.0000      0.0000
  4134 CA   GLY    254      0.0030      0.0000      0.0000
  4149 CA   PRO    255      0.0042      0.0000      0.0000
  4155 CA   TYR    256      0.0059      0.0000      0.0000
  4176 CA   GLY    257      0.0046      0.0000      0.0000
  4183 CA   ALA    258      0.0046      0.0000      0.0000
  4193 CA   HIE    259      0.0051      0.0000      0.0000
  4210 CA   THR    260      0.0037      0.0000      0.0000
  4224 CA   HIE    261      0.0030      0.0000      0.0000
  4241 CA   TRP    262      0.0026      0.0000      0.0000
  4265 CA   LYS    263      0.0026      0.0000      0.0000
  4287 CA   GLN    264      0.0024      0.0000      0.0000
  4304 CA   ILE    265      0.0021      0.0000      0.0000
  4323 CA   VAL    266      0.0018      0.0000      0.0000
  4339 CA   LEU    267      0.0016      0.0000      0.0000
  4358 CA   TYR    268      0.0016      0.0000      0.0000
  4379 CA   THR    269      0.0023      0.0000      0.0000
  4393 CA   ASP    270      0.0035      0.0000      0.0000
  4405 CA   HIE    271      0.0045      0.0000      0.0000
  4422 CA   ILE    272      0.0040      0.0000      0.0000
  4441 CA   ILE    273      0.0049      0.0000      0.0000
  4460 CA   THR    274      0.0058      0.0000      0.0000
  4474 CA   ALA    275      0.0086      0.0000      0.0000
  4484 CA   GLU    276      0.0160      0.0000      0.0000
  4499 CA   ARG    277      0.0221      0.0000      0.0000
  4523 CA   ASN    278      0.0202      0.0000      0.0000
  4537 CA   GLU    279      0.0090      0.0000      0.0000
  4552 CA   THR    280      0.0065      0.0000      0.0000
  4566 CA   LEU    281      0.0035      0.0000      0.0000
  4585 CA   LYS    282      0.0041      0.0000      0.0000
  4607 CA   GLY    283      0.0037      0.0000      0.0000
  4614 CA   ILE    284      0.0040      0.0000      0.0000
  4633 CA   PHE    285      0.0030      0.0000      0.0000
  4653 CA   ALA    286      0.0035      0.0000      0.0000
  4663 CA   LEU    287      0.0034      0.0000      0.0000
  4682 CA   LYS    288      0.0046      0.0000      0.0000
  4704 CA   ARG    289      0.0048      0.0000      0.0000
  4728 CA   ASN    290      0.0072      0.0000      0.0000
  4742 CA   GLN    291      0.0158      0.0000      0.0000
  4759 CA   LYS    292      0.0205      0.0000      0.0000
  4781 CA   ASN    293      0.0142      0.0000      0.0000
  4795 CA   LYS    294      0.0152      0.0000      0.0000
  4817 CA   ARG    295      0.0052      0.0000      0.0000
  4841 CA   HIE    296      0.0045      0.0000      0.0000
  4858 CA   LEU    297      0.0035      0.0000      0.0000
  4877 CA   ASP    298      0.0038      0.0000      0.0000
  4889 CA   MET    299      0.0032      0.0000      0.0000
  4906 CA   LYS    300      0.0036      0.0000      0.0000
  4928 CA   LEU    301      0.0032      0.0000      0.0000
  4947 CA   HIE    302      0.0038      0.0000      0.0000
  4964 CA   TYR    303      0.0037      0.0000      0.0000
  4985 CA   ILE    304      0.0048      0.0000      0.0000
  5004 CA   PHE    305      0.0056      0.0000      0.0000
  5024 CA   ASP    306      0.0085      0.0000      0.0000
  5036 CA   GLY    307      0.0117      0.0000      0.0000
  5043 CA   VAL    308      0.0231      0.0000      0.0000
  5059 CA   HIE    309      0.0454      0.0000      0.0000
  5076 CA   THR    310      0.0292      0.0000      0.0000
  5090 CA   LYS    311      0.0138      0.0000      0.0000
  5112 CA   ALA    312      0.0106      0.0000      0.0000
  5122 CA   LYS    313      0.0065      0.0000      0.0000
  5144 CA   SER    314      0.0060      0.0000      0.0000
  5155 CA   THR    315      0.0057      0.0000      0.0000
  5169 CA   GLN    316      0.0040      0.0000      0.0000
  5186 CA   LEU    317      0.0039      0.0000      0.0000
  5205 CA   PHE    318      0.0032      0.0000      0.0000
  5225 CA   ASN    319      0.0041      0.0000      0.0000
  5239 CA   ILE    320      0.0046      0.0000      0.0000
  5258 CA   SER    321      0.0077      0.0000      0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.