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***  Robetta04  ***

B-factor analysis for ID 20122820011065309

Overall B-factor prediction

Correlation= 0.219 for 122 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   CYS      1      0.0078      3.8320      9.9300
    15 CA   VAL      2      0.0095      4.7464      7.5300
    31 CA   PHE      3      0.0038      1.6083      6.2000
    51 CA   CYS      4      0.0058      2.7369      5.3300
    62 CA   ARG      5      0.0062      2.9690      4.4900
    86 CA   LEU      6      0.0055      2.5677      3.0100
   105 CA   PRO      7      0.0111      5.6197      1.8300
   119 CA   ALA      8      0.0076      3.7369      1.7200
   129 CA   HIS      9      0.0170      8.8753      1.4600
   146 CA   ASP     10      0.0078      3.8332      0.9900
   158 CA   LEU     11      0.0033      1.3645      1.0000
   177 CA   SER     12      0.0037      1.5622      0.9700
   188 CA   GLY     13      0.0049      2.2095      0.9300
   195 CA   ARG     14      0.0033      1.3774      0.8900
   219 CA   LEU     15      0.0019      0.5584      0.9400
   238 CA   ALA     16      0.0028      1.0723      1.0400
   248 CA   ARG     17      0.0050      2.3099      1.0500
   272 CA   LEU     18      0.0022      0.7477      0.9600
   291 CA   CYS     19      0.0019      0.5754      0.9300
   302 CA   SER     20      0.0037      1.5622      1.0200
   313 CA   GLN     21      0.0046      2.0818      0.8600
   330 CA   MET     22      0.0021      0.6703      0.8100
   347 CA   GLU     23      0.0038      1.6375      1.1900
   362 CA   ALA     24      0.0079      3.9083      1.3400
   372 CA   ARG     25      0.0067      3.2341      1.4700
   396 CA   GLN     26      0.0051      2.3439      1.1800
   413 CA   LYS     27      0.0178      9.3067      1.3100
   435 CA   GLU     28      0.0457     24.6620      1.1600
   450 CA   CYS     29      0.0113      5.7434      1.0100
   461 CA   GLY     30      0.0165      8.6311      1.4100
   468 CA   ALA     31      0.0290     15.4555      1.4400
   478 CA   SER     32      0.0115      5.8777      1.2400
   489 CA   PRO     33      0.0035      1.4803      1.4400
   503 CA   ASP     34      0.0064      3.0339      1.5500
   515 CA   PHE     35      0.0026      0.9915      1.5800
   535 CA   SER     36      0.0052      2.4172      1.7300
   546 CA   ALA     37      0.0068      3.2843      2.2500
   556 CA   PHE     38      0.0202     10.6614      1.8900
   576 CA   ALA     39      0.0075      3.6727      1.3700
   586 CA   LEU     40      0.0068      3.2642      1.1000
   605 CA   ASP     41      0.0272     14.4642      1.4000
   617 CA   GLU     42      0.0589     31.8767      1.2100
   632 CA   VAL     43      0.0135      6.9759      1.2300
   648 CA   SER     44      0.0089      4.4047      1.0000
   659 CA   MET     45      0.0030      1.1650      0.9800
   676 CA   ASN     46      0.0032      1.2782      1.1000
   690 CA   LYS     47      0.0056      2.6011      1.0100
   712 CA   VAL     48      0.0029      1.1333      0.8700
   728 CA   THR     49      0.0019      0.5948      0.8400
   742 CA   GLU     50      0.0026      0.9522      0.9800
   757 CA   LYS     51      0.0033      1.3745      0.8800
   779 CA   THR     52      0.0017      0.4882      0.8000
   793 CA   HIS     53      0.0016      0.4439      0.8900
   810 CA   ARG     54      0.0028      1.0856      0.9500
   834 CA   VAL     55      0.0026      0.9780      0.8000
   850 CA   LEU     56      0.0017      0.4879      0.7600
   869 CA   ARG     57      0.0029      1.1547      0.9200
   893 CA   VAL     58      0.0055      2.5757      1.0800
   909 CA   MET     59      0.0039      1.6605      0.9400
   926 CA   GLU     60      0.0047      2.1331      0.9100
   941 CA   ILE     61      0.0105      5.2932      1.2200
   960 CA   LYS     62      0.0215     11.3450      1.3100
   982 CA   GLU     63      0.0208     10.9707      1.4300
   997 CA   ALA     64      0.0163      8.5145      1.6000
  1007 CA   VAL     65      0.0069      3.3045      1.5900
  1023 CA   SER     66      0.0087      4.3383      1.3700
  1034 CA   SER     67      0.0072      3.5122      1.0600
  1045 CA   LEU     68      0.0029      1.1518      1.0000
  1064 CA   PRO     69      0.0048      2.1567      1.1100
  1078 CA   SER     70      0.0064      3.0462      0.9400
  1089 CA   TYR     71      0.0027      1.0275      0.7900
  1110 CA   TRP     72      0.0023      0.7959      0.7900
  1134 CA   SER     73      0.0032      1.2975      0.8600
  1145 CA   TRP     74      0.0026      0.9901      0.8700
  1169 CA   LEU     75      0.0018      0.5354      0.8100
  1188 CA   ARG     76      0.0023      0.7906      0.8100
  1212 CA   LYS     77      0.0025      0.9423      0.9800
  1234 CA   THR     78      0.0019      0.5868      1.1100
  1248 CA   LYS     79      0.0019      0.5960      1.0300
  1270 CA   LEU     80      0.0022      0.7248      0.9700
  1289 CA   PRO     81      0.0026      0.9622      0.9800
  1303 CA   GLU     82      0.0031      1.2718      1.5600
  1318 CA   TYR     83      0.0029      1.1110      1.2300
  1339 CA   THR     84      0.0065      3.1270      2.5000
  1353 CA   ARG     85      0.0081      3.9785      3.7000
  1377 CA   GLU     86      0.0056      2.6319      3.2100
  1392 CA   ALA     87      0.0034      1.4203      3.1100
  1402 CA   LEU     88      0.0041      1.7925      2.2000
  1421 CA   CYS     89      0.0031      1.2282      1.9200
  1431 CA   PRO     90      0.0041      1.7947      1.9700
  1445 CA   PRO     91      0.0045      2.0087      2.7200
  1459 CA   ALA     92      0.0047      2.1060      2.8100
  1469 CA   CYS     93      0.0131      6.7378      2.8800
  1480 CA   ARG     94      0.0190     10.0041      4.0800
  1504 CA   GLY     95      0.0144      7.4374      6.0600
  1511 CA   SER     96      0.0165      8.5937      7.2400
  1522 CA   THR     97      0.0062      2.9362      7.7500
  1536 CA   THR     98      0.0103      5.1719      8.6800
  1550 CA   LEU     99      0.0196     10.2836      9.1300
  1569 CA   TYR    100      0.0092      4.5896      9.9300
  1590 CA   ASN    101      0.0171      8.9440     10.7700
  1604 CA   CYS    102      0.0056      2.6020     11.5200
  1615 CA   SER    103      0.0100      5.0343     12.6600
  1626 CA   THR    104      0.0060      2.8373     13.5500
  1640 CA   CYS    105      0.0037      1.5934     12.7500
  1650 CA   LYS    106      0.0045      1.9974     12.9100
  1672 CA   GLY    107      0.0058      2.7514     13.0000
  1679 CA   THR    108      0.0043      1.9072     13.4200
  1693 CA   GLU    109      0.0058      2.7438     13.8100
  1708 CA   VAL    110      0.0034      1.3962     13.2300
  1724 CA   SER    111      0.0030      1.1754     13.5500
  1735 CA   CYS    112      0.0052      2.3710     13.8600
  1746 CA   TRP    113      0.0086      4.2905     14.8600
  1770 CA   PRO    114      0.0212     11.1652     15.8400
  1784 CA   ARG    115      0.0485     26.1876     16.9300
  1808 CA   LYS    116      0.0200     10.5026     16.6800
  1830 CA   ARG    117      0.0287     15.2844     15.8100
  1854 CA   CYS    118      0.0086      4.2517     14.4900
  1865 CA   PHE    119      0.0038      1.6015     13.9100
  1885 CA   PRO    120      0.0077      3.7790     14.4800
  1899 CA   GLY    121      0.0119      6.0785     14.6500
  1906 CA   SER    122      0.0157      8.1481     14.7100

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.