CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  Robetta03  ***

B-factor analysis for ID 20122820005765219

Overall B-factor prediction

Correlation= 0.747 for 122 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   CYS      1      0.0070      2.2330      2.7100
    14 CA   VAL      2      0.0053      2.1943      3.9300
    30 CA   PHE      3      0.0039      2.1620      3.4200
    50 CA   CYS      4      0.0057      2.2028      2.5200
    60 CA   ARG      5      0.0062      2.2154      2.9500
    84 CA   LEU      6      0.0058      2.2052      2.7400
   103 CA   PRO      7      0.0116      2.3372      3.4400
   117 CA   ALA      8      0.0053      2.1941      4.1100
   127 CA   HIS      9      0.0045      2.1762      3.9100
   144 CA   ASP     10      0.0099      2.2986      4.1300
   156 CA   LEU     11      0.0084      2.2650      3.9300
   175 CA   SER     12      0.0225      2.5843      4.2600
   186 CA   GLY     13      0.0233      2.6044      4.1000
   193 CA   ARG     14      0.0150      2.4155      4.5600
   217 CA   LEU     15      0.0287      2.7271      3.9700
   236 CA   ALA     16      0.0412      3.0107      4.3100
   246 CA   ARG     17      0.0286      2.7231      4.0300
   270 CA   LEU     18      0.0131      2.3707      3.0400
   289 CA   CYS     19      0.0139      2.3886      2.7500
   300 CA   SER     20      0.0193      2.5116      3.0600
   311 CA   GLN     21      0.0126      2.3596      2.6300
   328 CA   MET     22      0.0064      2.2194      2.1200
   345 CA   GLU     23      0.0090      2.2775      2.4600
   360 CA   ALA     24      0.0117      2.3399      2.5400
   370 CA   ARG     25      0.0075      2.2453      1.9500
   394 CA   GLN     26      0.0049      2.1858      2.4600
   411 CA   LYS     27      0.0091      2.2805      3.2400
   433 CA   GLU     28      0.0120      2.3462      2.8200
   448 CA   CYS     29      0.0074      2.2416      2.8600
   459 CA   GLY     30      0.0070      2.2329      4.1100
   466 CA   ALA     31      0.0069      2.2300      5.3000
   476 CA   SER     32      0.0124      2.3554      5.2100
   487 CA   PRO     33      0.0185      2.4937      5.5800
   501 CA   ASP     34      0.0245      2.6298      5.5500
   513 CA   PHE     35      0.0166      2.4513      4.9000
   533 CA   SER     36      0.0146      2.4064      3.8900
   544 CA   ALA     37      0.0257      2.6571      3.1700
   554 CA   PHE     38      0.0127      2.3617      2.2600
   574 CA   ALA     39      0.0116      2.3363      1.4400
   584 CA   LEU     40      0.0107      2.3173      1.0700
   603 CA   ASP     41      0.0129      2.3664      1.0100
   615 CA   GLU     42      0.0139      2.3902      1.0100
   630 CA   VAL     43      0.0174      2.4701      1.0900
   646 CA   SER     44      0.0124      2.3558      1.0300
   657 CA   MET     45      0.0095      2.2891      0.9200
   674 CA   ASN     46      0.0113      2.3313      0.9600
   688 CA   LYS     47      0.0123      2.3526      1.1300
   710 CA   VAL     48      0.0083      2.2624      1.1200
   726 CA   THR     49      0.0068      2.2278      1.0400
   740 CA   GLU     50      0.0088      2.2739      1.0900
   755 CA   LYS     51      0.0081      2.2576      1.2000
   777 CA   THR     52      0.0043      2.1720      1.1700
   791 CA   HIS     53      0.0052      2.1910      1.1800
   808 CA   ARG     54      0.0085      2.2658      1.2700
   832 CA   VAL     55      0.0051      2.1893      1.2300
   848 CA   LEU     56      0.0033      2.1495      1.3400
   867 CA   ARG     57      0.0073      2.2399      1.3900
   891 CA   VAL     58      0.0107      2.3163      1.5100
   907 CA   MET     59      0.0073      2.2392      1.7300
   924 CA   GLU     60      0.0105      2.3118      1.7800
   939 CA   ILE     61      0.0212      2.5557      1.7000
   958 CA   LYS     62      0.0237      2.6128      2.2900
   980 CA   GLU     63      0.0208      2.5470      2.1800
   995 CA   ALA     64      0.0115      2.3350      2.3800
  1005 CA   VAL     65      0.0125      2.3576      2.6000
  1021 CA   SER     66      0.0186      2.4975      2.5300
  1032 CA   SER     67      0.0129      2.3667      1.7100
  1043 CA   LEU     68      0.0061      2.2118      1.5600
  1062 CA   PRO     69      0.0083      2.2623      1.5600
  1076 CA   SER     70      0.0120      2.3476      1.2500
  1087 CA   TYR     71      0.0062      2.2143      1.1900
  1108 CA   TRP     72      0.0050      2.1884      1.4700
  1132 CA   SER     73      0.0111      2.3256      1.6000
  1143 CA   TRP     74      0.0107      2.3177      1.5000
  1167 CA   LEU     75      0.0065      2.2222      1.4300
  1186 CA   ARG     76      0.0105      2.3134      1.8800
  1210 CA   LYS     77      0.0209      2.5487      2.2700
  1232 CA   THR     78      0.0121      2.3478      1.9700
  1246 CA   LYS     79      0.0191      2.5084      2.9000
  1268 CA   LEU     80      0.0143      2.3990      2.2000
  1287 CA   PRO     81      0.0238      2.6152      2.9600
  1301 CA   GLU     82      0.0248      2.6377      2.2500
  1316 CA   TYR     83      0.0158      2.4317      1.9100
  1337 CA   THR     84      0.0186      2.4960      2.5700
  1351 CA   ARG     85      0.0315      2.7888      2.5800
  1375 CA   GLU     86      0.0260      2.6657      3.0400
  1390 CA   ALA     87      0.0156      2.4275      2.8300
  1400 CA   LEU     88      0.0141      2.3941      1.9900
  1419 CA   CYS     89      0.0139      2.3901      1.7200
  1429 CA   PRO     90      0.0187      2.4981      2.4700
  1443 CA   PRO     91      0.0231      2.5989      3.0600
  1457 CA   ALA     92      0.0567      3.3625      3.2200
  1467 CA   CYS     93      0.0271      2.6896      3.1800
  1477 CA   ARG     94      0.0205      2.5396      2.7000
  1501 CA   GLY     95      0.0188      2.5012      2.1400
  1508 CA   SER     96      0.0209      2.5483      1.8300
  1519 CA   THR     97      0.0170      2.4608      1.7400
  1533 CA   THR     98      0.0160      2.4363      1.4700
  1547 CA   LEU     99      0.0129      2.3673      0.9900
  1566 CA   TYR    100      0.0107      2.3170      1.1900
  1587 CA   ASN    101      0.0111      2.3268      1.2800
  1601 CA   CYS    102      0.0085      2.2674      1.4300
  1611 CA   SER    103      0.0111      2.3258      1.4700
  1622 CA   THR    104      0.0126      2.3611      1.4300
  1636 CA   CYS    105      0.0091      2.2811      1.4100
  1646 CA   LYS    106      0.0154      2.4231      1.2900
  1668 CA   GLY    107      0.0156      2.4280      1.2400
  1675 CA   THR    108      0.0208      2.5465      1.2800
  1689 CA   GLU    109      0.0246      2.6327      1.8500
  1704 CA   VAL    110      0.0171      2.4613      1.3300
  1720 CA   SER    111      0.0269      2.6848      3.0500
  1731 CA   CYS    112      0.0161      2.4401      2.5000
  1741 CA   TRP    113      0.0244      2.6275      3.4600
  1765 CA   PRO    114      0.0326      2.8138      4.2000
  1779 CA   ARG    115      0.0654      3.5595      4.5600
  1803 CA   LYS    116      0.0977      4.2937      6.0500
  1825 CA   ARG    117      0.1308      5.0477      6.8700
  1849 CA   CYS    118      0.0878      4.0704      6.3400
  1859 CA   PHE    119      0.1706      5.9513      8.1800
  1879 CA   PRO    120      0.2317      7.3399      9.3400
  1893 CA   GLY    121      0.6357     16.5236     10.8500
  1900 CA   SER    122      0.6095     15.9288     11.3700

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.