CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Elnemo is running on a new server.
Should you encounter any unexpected behaviour,
please let us know.


***    ***

Normal Mode Analysis for ID EXAMPLE2

conformational change will be analysed

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.7131 0.804 189.9586
mode 8 1.01 0.6660 0.810 16.0909
mode 9 1.41 0.6057 0.846 39.9778
mode 10 1.58 0.1951 0.864 28.5394
mode 11 1.80 0.2517 0.864 -2.8173
mode 12 1.97 0.7070 0.864 -2.2813
mode 13 2.00 0.6891 0.884 -30.2923
mode 14 2.14 0.4948 0.885 0.9511
mode 15 2.26 0.3981 0.886 -7.1980
mode 16 2.40 0.5484 0.887 -6.9885
mode 17 2.49 0.4083 0.887 -3.7060
mode 18 2.67 0.3188 0.887 -0.0151
mode 19 2.74 0.3120 0.887 -4.2783
mode 20 2.79 0.1495 0.888 6.1544
mode 21 2.93 0.3756 0.888 0.8667
mode 22 2.97 0.4747 0.890 -7.5978
mode 23 3.00 0.4770 0.892 10.4040
mode 24 3.06 0.4948 0.892 1.0810
mode 25 3.17 0.3514 0.892 3.4289
mode 26 3.23 0.3024 0.893 6.8754
mode 27 3.29 0.3804 0.894 -5.8932
mode 28 3.31 0.3497 0.897 -11.4764
mode 29 3.36 0.4713 0.898 -4.4276
mode 30 3.42 0.3786 0.899 -7.4666
mode 31 3.45 0.4747 0.899 -0.4599
mode 32 3.47 0.4435 0.899 4.3787
mode 33 3.51 0.3311 0.900 -6.6947
mode 34 3.58 0.4442 0.901 4.0043
mode 35 3.59 0.3022 0.901 -3.6324
mode 36 3.64 0.6417 0.901 -2.9639
mode 37 3.65 0.5081 0.901 -0.0485
mode 38 3.74 0.2509 0.901 -2.0834
mode 39 3.74 0.3716 0.902 5.9895
mode 40 3.83 0.2914 0.902 1.2573
mode 41 3.88 0.2702 0.903 -5.2138
mode 42 3.96 0.5322 0.903 1.0341
mode 43 3.98 0.4089 0.903 1.3091
mode 44 4.03 0.3975 0.903 4.9523
mode 45 4.07 0.4967 0.904 7.0197
mode 46 4.08 0.4676 0.904 -0.5976
mode 47 4.11 0.6349 0.904 -2.1909
mode 48 4.14 0.4804 0.904 -1.3173
mode 49 4.20 0.4857 0.905 3.8954
mode 50 4.22 0.3450 0.905 3.1099
mode 51 4.26 0.3631 0.906 5.5384
mode 52 4.31 0.4447 0.906 0.3308
mode 53 4.36 0.5026 0.906 3.6667
mode 54 4.40 0.3961 0.906 0.3410
mode 55 4.43 0.5167 0.906 3.8921
mode 56 4.46 0.4090 0.907 -3.1900
mode 57 4.47 0.2484 0.907 1.5129
mode 58 4.51 0.6140 0.908 -8.4729
mode 59 4.55 0.4414 0.908 0.4405
mode 60 4.62 0.4878 0.908 1.4460
mode 61 4.66 0.4333 0.908 2.9011
mode 62 4.67 0.4322 0.910 -7.5929
mode 63 4.71 0.4132 0.910 4.3357
mode 64 4.75 0.3088 0.910 -2.9793
mode 65 4.80 0.5363 0.911 -2.7687
mode 66 4.83 0.4382 0.911 4.1625
mode 67 4.86 0.5394 0.911 -0.2747
mode 68 4.86 0.4389 0.911 -3.3601
mode 69 4.91 0.4744 0.911 -0.1684
mode 70 4.94 0.4961 0.912 -6.0477
mode 71 4.95 0.5919 0.912 -3.6621
mode 72 4.99 0.4250 0.912 -2.4470
mode 73 5.05 0.5273 0.912 -1.1144
mode 74 5.05 0.4377 0.912 -0.2922
mode 75 5.05 0.3422 0.913 2.1901
mode 76 5.11 0.3566 0.913 1.7137
mode 77 5.14 0.4347 0.913 1.4495
mode 78 5.17 0.5090 0.913 -5.2695
mode 79 5.21 0.4952 0.913 -3.2386
mode 80 5.25 0.5052 0.914 3.0850
mode 81 5.26 0.2783 0.914 -0.3758
mode 82 5.28 0.4287 0.914 -2.1528
mode 83 5.35 0.4339 0.914 3.0276
mode 84 5.38 0.4035 0.914 3.2403
mode 85 5.40 0.2860 0.915 3.5196
mode 86 5.40 0.4340 0.915 1.9723
mode 87 5.44 0.3883 0.915 -1.6899
mode 88 5.47 0.5104 0.915 -3.2217
mode 89 5.50 0.4218 0.915 -4.3341
mode 90 5.54 0.5664 0.915 -0.5425
mode 91 5.59 0.2186 0.916 -3.3491
mode 92 5.60 0.4524 0.916 -3.2780
mode 93 5.63 0.5247 0.916 -1.7628
mode 94 5.65 0.2667 0.916 -3.1535
mode 95 5.69 0.4860 0.916 1.6348
mode 96 5.71 0.5115 0.917 -6.3897
mode 97 5.72 0.4472 0.919 8.5498
mode 98 5.77 0.5793 0.919 1.6608
mode 99 5.78 0.5366 0.920 6.3670
mode 100 5.78 0.3854 0.920 -1.6401
mode 101 5.82 0.5178 0.920 1.5634
mode 102 5.86 0.5208 0.920 3.6477
mode 103 5.89 0.5334 0.920 -1.4060
mode 104 5.92 0.5231 0.920 0.1803
mode 105 5.94 0.4945 0.922 -8.8284
mode 106 5.95 0.4662 0.922 2.3349

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.