CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  vB-P  ***

Normal Mode Analysis for ID 2502131145134657

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6404
mode 8 1.12 0.5261
mode 9 1.26 0.5272
mode 10 1.50 0.3723
mode 11 1.69 0.2497
mode 12 1.76 0.3066
mode 13 1.85 0.7210
mode 14 1.98 0.6970
mode 15 2.00 0.6788
mode 16 2.19 0.5932
mode 17 2.31 0.5493
mode 18 2.42 0.3320
mode 19 2.46 0.4133
mode 20 2.55 0.6279
mode 21 2.66 0.5213
mode 22 2.71 0.5937
mode 23 2.74 0.4562
mode 24 2.85 0.5536
mode 25 2.89 0.3988
mode 26 2.93 0.5738
mode 27 2.95 0.4261
mode 28 3.06 0.5754
mode 29 3.08 0.6333
mode 30 3.15 0.3997
mode 31 3.17 0.1412
mode 32 3.23 0.4692
mode 33 3.26 0.5444
mode 34 3.32 0.5398
mode 35 3.39 0.5541
mode 36 3.44 0.5005
mode 37 3.54 0.5242
mode 38 3.60 0.4760
mode 39 3.65 0.2652
mode 40 3.67 0.4621
mode 41 3.69 0.5001
mode 42 3.74 0.5016
mode 43 3.78 0.5679
mode 44 3.87 0.5701
mode 45 3.91 0.4679
mode 46 3.95 0.5291
mode 47 3.97 0.5986
mode 48 4.01 0.3993
mode 49 4.07 0.4522
mode 50 4.08 0.5265
mode 51 4.13 0.5245
mode 52 4.15 0.4884
mode 53 4.18 0.4769
mode 54 4.26 0.3914
mode 55 4.27 0.4939
mode 56 4.31 0.5753
mode 57 4.34 0.5884
mode 58 4.38 0.5574
mode 59 4.42 0.3794
mode 60 4.46 0.4364
mode 61 4.48 0.5172
mode 62 4.51 0.5401
mode 63 4.53 0.5013
mode 64 4.56 0.4850
mode 65 4.57 0.4306
mode 66 4.61 0.4227
mode 67 4.65 0.5276
mode 68 4.69 0.4968
mode 69 4.69 0.4231
mode 70 4.73 0.4068
mode 71 4.78 0.4985
mode 72 4.79 0.4930
mode 73 4.81 0.3883
mode 74 4.81 0.4157
mode 75 4.85 0.4149
mode 76 4.89 0.4784
mode 77 4.90 0.4731
mode 78 4.95 0.4363
mode 79 4.99 0.3511
mode 80 5.00 0.4960
mode 81 5.02 0.3323
mode 82 5.05 0.3538
mode 83 5.07 0.5739
mode 84 5.08 0.5009
mode 85 5.10 0.3380
mode 86 5.14 0.5360
mode 87 5.15 0.4697
mode 88 5.18 0.5567
mode 89 5.18 0.4968
mode 90 5.21 0.5362
mode 91 5.24 0.5222
mode 92 5.26 0.4726
mode 93 5.28 0.4553
mode 94 5.30 0.3287
mode 95 5.32 0.4790
mode 96 5.36 0.4403
mode 97 5.37 0.4556
mode 98 5.41 0.5440
mode 99 5.41 0.5637
mode 100 5.46 0.4681
mode 101 5.48 0.5485
mode 102 5.50 0.5382
mode 103 5.52 0.5675
mode 104 5.53 0.5352
mode 105 5.58 0.5257
mode 106 5.60 0.4101

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.