Should you encounter any unexpected behaviour,
please let us know.

* fad *

Normal Mode Analysis for ID 2412300842251574416

conformational change will be analysed

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)

mode 7 1.00 0.0074 NaN 0.0000

mode 8 2.95 0.0188 NaN 0.0000

mode 9 4.05 0.2335 NaN 0.0000

mode 10 4.31 0.2790 NaN 0.0000

mode 11 4.84 0.5324 NaN 0.0000

mode 12 4.93 0.1586 NaN 0.0000

mode 13 5.29 0.2136 NaN 0.0000

mode 14 5.45 0.1447 NaN 0.0000

mode 15 5.69 0.2165 NaN 0.0000

mode 16 6.00 0.1100 NaN 0.0000

mode 17 6.28 0.5502 NaN 0.0000

mode 18 6.56 0.2444 NaN 0.0000

mode 19 6.68 0.4316 NaN 0.0000

mode 20 6.80 0.5363 NaN 0.0000

mode 21 7.12 0.4751 NaN 0.0000

mode 22 7.20 0.2399 NaN 0.0000

mode 23 7.32 0.5240 NaN 0.0000

mode 24 7.65 0.6035 NaN 0.0000

mode 25 7.79 0.5592 NaN 0.0000

mode 26 7.98 0.4685 NaN 0.0000

mode 27 8.08 0.4929 NaN 0.0000

mode 28 8.14 0.4366 NaN 0.0000

mode 29 8.19 0.3413 NaN 0.0000

mode 30 8.64 0.3888 NaN 0.0000

mode 31 8.80 0.4458 NaN 0.0000

mode 32 8.93 0.3974 NaN 0.0000

mode 33 9.10 0.4064 NaN 0.0000

mode 34 9.30 0.3333 NaN 0.0000

mode 35 9.38 0.5121 NaN 0.0000

mode 36 9.49 0.4913 NaN 0.0000

mode 37 9.61 0.3720 NaN 0.0000

mode 38 9.86 0.2429 NaN 0.0000

mode 39 9.96 0.4519 NaN 0.0000

mode 40 9.99 0.3484 NaN 0.0000

mode 41 10.29 0.4528 NaN 0.0000

mode 42 10.34 0.4707 NaN 0.0000

mode 43 10.42 0.4986 NaN 0.0000

mode 44 10.61 0.5483 NaN 0.0000

mode 45 10.75 0.6055 NaN 0.0000

mode 46 10.80 0.5281 NaN 0.0000

mode 47 10.91 0.5604 NaN 0.0000

mode 48 11.04 0.4287 NaN 0.0000

mode 49 11.09 0.4678 NaN 0.0000

mode 50 11.32 0.4390 NaN 0.0000

mode 51 11.37 0.5330 NaN 0.0000

mode 52 11.57 0.4851 NaN 0.0000

mode 53 11.59 0.4845 NaN 0.0000

mode 54 11.68 0.5232 NaN 0.0000

mode 55 11.93 0.5324 NaN 0.0000

mode 56 11.96 0.6201 NaN 0.0000

mode 57 12.03 0.3791 NaN 0.0000

mode 58 12.07 0.6167 NaN 0.0000

mode 59 12.23 0.5523 NaN 0.0000

mode 60 12.43 0.4175 NaN 0.0000

mode 61 12.47 0.5137 NaN 0.0000

mode 62 12.63 0.3219 NaN 0.0000

mode 63 12.70 0.5329 NaN 0.0000

mode 64 12.71 0.5890 NaN 0.0000

mode 65 12.84 0.5308 NaN 0.0000

mode 66 12.92 0.5788 NaN 0.0000

mode 67 12.99 0.5106 NaN 0.0000

mode 68 13.07 0.3744 NaN 0.0000

mode 69 13.16 0.4233 NaN 0.0000

mode 70 13.22 0.5304 NaN 0.0000

mode 71 13.44 0.5261 NaN 0.0000

mode 72 13.52 0.4856 NaN 0.0000

mode 73 13.60 0.4946 NaN 0.0000

mode 74 13.73 0.5195 NaN 0.0000

mode 75 13.79 0.4702 NaN 0.0000

mode 76 13.85 0.6245 NaN 0.0000

mode 77 13.99 0.5771 NaN 0.0000

mode 78 14.07 0.4655 NaN 0.0000

mode 79 14.15 0.5324 NaN 0.0000

mode 80 14.22 0.5038 NaN 0.0000

mode 81 14.36 0.5579 NaN 0.0000

mode 82 14.50 0.5418 NaN 0.0000

mode 83 14.66 0.5233 NaN 0.0000

mode 84 14.81 0.5418 NaN 0.0000

mode 85 15.01 0.6372 NaN 0.0000

mode 86 15.14 0.4969 NaN 0.0000

mode 87 15.18 0.5995 NaN 0.0000

mode 88 15.28 0.5926 NaN 0.0000

mode 89 15.40 0.4916 NaN 0.0000

mode 90 15.55 0.4116 NaN 0.0000

mode 91 15.61 0.4755 NaN 0.0000

mode 92 15.65 0.4605 NaN 0.0000

mode 93 15.76 0.4880 NaN 0.0000

mode 94 15.80 0.5028 NaN 0.0000

mode 95 15.85 0.4698 NaN 0.0000

mode 96 16.01 0.3779 NaN 0.0000

mode 97 16.08 0.4621 NaN 0.0000

mode 98 16.20 0.4988 NaN 0.0000

mode 99 16.26 0.4135 NaN 0.0000

mode 100 16.36 0.6207 NaN 0.0000

mode 101 16.42 0.5320 NaN 0.0000

mode 102 16.43 0.4455 NaN 0.0000

mode 103 16.57 0.5964 NaN 0.0000

mode 104 16.67 0.5729 NaN 0.0000

mode 105 16.72 0.5496 NaN 0.0000

mode 106 16.85 0.5818 NaN 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** fad ***

Normal Mode Analysis for ID 2412300842251574416

conformational change will be analysed

Should you encounter any unexpected behaviour,
please let us know.

* fad *