CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  STRUCTURAL PROTEIN 17-JUL-23 8PUZ  ***

Normal Mode Analysis for ID 2406271123311174200

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5935
mode 8 1.19 0.3420
mode 9 1.28 0.3730
mode 10 1.43 0.3484
mode 11 1.48 0.1726
mode 12 1.58 0.5851
mode 13 1.62 0.4752
mode 14 1.72 0.3506
mode 15 1.87 0.4967
mode 16 1.89 0.6611
mode 17 1.97 0.4761
mode 18 2.00 0.5518
mode 19 2.06 0.4690
mode 20 2.12 0.5457
mode 21 2.14 0.3603
mode 22 2.24 0.4406
mode 23 2.29 0.5049
mode 24 2.38 0.3140
mode 25 2.40 0.4711
mode 26 2.42 0.4306
mode 27 2.49 0.3198
mode 28 2.55 0.5639
mode 29 2.60 0.3353
mode 30 2.66 0.5602
mode 31 2.72 0.4475
mode 32 2.78 0.4696
mode 33 2.82 0.3420
mode 34 2.83 0.4153
mode 35 2.86 0.3965
mode 36 2.95 0.5060
mode 37 2.99 0.3232
mode 38 3.03 0.3828
mode 39 3.06 0.4573
mode 40 3.11 0.3826
mode 41 3.12 0.3994
mode 42 3.16 0.4401
mode 43 3.22 0.1538
mode 44 3.23 0.3363
mode 45 3.26 0.3506
mode 46 3.29 0.2285
mode 47 3.30 0.1967
mode 48 3.38 0.3216
mode 49 3.40 0.3871
mode 50 3.41 0.4015
mode 51 3.43 0.4758
mode 52 3.47 0.4467
mode 53 3.51 0.4304
mode 54 3.53 0.4052
mode 55 3.53 0.3910
mode 56 3.57 0.3617
mode 57 3.58 0.4078
mode 58 3.59 0.3322
mode 59 3.62 0.2341
mode 60 3.66 0.3470
mode 61 3.66 0.2856
mode 62 3.70 0.4123
mode 63 3.73 0.2410
mode 64 3.75 0.4368
mode 65 3.79 0.4044
mode 66 3.80 0.3195
mode 67 3.83 0.5278
mode 68 3.84 0.2884
mode 69 3.86 0.4385
mode 70 3.90 0.4065
mode 71 3.91 0.2069
mode 72 3.92 0.3808
mode 73 3.96 0.4183
mode 74 4.00 0.4194
mode 75 4.01 0.2574
mode 76 4.02 0.4031
mode 77 4.03 0.4222
mode 78 4.06 0.3468
mode 79 4.08 0.4215
mode 80 4.09 0.3897
mode 81 4.10 0.4705
mode 82 4.12 0.4714
mode 83 4.12 0.4057
mode 84 4.13 0.4975
mode 85 4.15 0.3788
mode 86 4.17 0.3393
mode 87 4.20 0.3921
mode 88 4.22 0.4152
mode 89 4.23 0.5054
mode 90 4.26 0.3590
mode 91 4.30 0.3574
mode 92 4.30 0.3888
mode 93 4.31 0.3634
mode 94 4.33 0.3512
mode 95 4.35 0.3632
mode 96 4.37 0.4090
mode 97 4.37 0.3993
mode 98 4.38 0.1755
mode 99 4.39 0.4129
mode 100 4.40 0.4278
mode 101 4.41 0.3654
mode 102 4.43 0.4783
mode 103 4.44 0.4180
mode 104 4.45 0.4687
mode 105 4.48 0.4330
mode 106 4.50 0.4171

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.