CNRS Nantes University US2B US2B
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***  TestViola  ***

Normal Mode Analysis for ID 2406051430261165924

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1997
mode 8 1.72 0.2792
mode 9 1.85 0.3318
mode 10 2.07 0.3063
mode 11 2.37 0.5425
mode 12 2.92 0.4228
mode 13 3.63 0.4200
mode 14 3.79 0.3190
mode 15 4.47 0.4270
mode 16 4.81 0.4311
mode 17 5.25 0.2241
mode 18 5.82 0.4014
mode 19 5.98 0.3814
mode 20 7.28 0.3669
mode 21 8.32 0.3506
mode 22 8.86 0.4066
mode 23 9.85 0.3788
mode 24 10.30 0.3285
mode 25 10.42 0.1856
mode 26 10.92 0.3697
mode 27 11.39 0.4033
mode 28 11.79 0.4551
mode 29 12.81 0.3890
mode 30 13.18 0.4674
mode 31 14.41 0.4583
mode 32 14.61 0.4508
mode 33 15.19 0.4799
mode 34 15.93 0.4561
mode 35 16.62 0.3805
mode 36 18.16 0.3120
mode 37 18.72 0.2473
mode 38 20.22 0.2943
mode 39 20.90 0.3932
mode 40 21.38 0.4773
mode 41 22.66 0.1828
mode 42 24.14 0.1622
mode 43 24.79 0.2205
mode 44 25.62 0.3999
mode 45 28.26 0.2197
mode 46 28.40 0.1844
mode 47 28.84 0.2536
mode 48 29.63 0.3145
mode 49 31.06 0.3635
mode 50 33.30 0.3488
mode 51 34.35 0.2557
mode 52 36.03 0.4304
mode 53 36.68 0.2156
mode 54 38.30 0.2990
mode 55 39.15 0.2307
mode 56 40.13 0.3051
mode 57 40.97 0.2946
mode 58 41.28 0.2560
mode 59 42.56 0.3204
mode 60 44.96 0.2579
mode 61 45.29 0.1772
mode 62 46.35 0.4252
mode 63 47.43 0.2102
mode 64 47.87 0.3741
mode 65 48.08 0.1237
mode 66 50.04 0.3733
mode 67 51.84 0.4382
mode 68 53.46 0.2339
mode 69 55.07 0.2266
mode 70 56.13 0.3368
mode 71 56.99 0.1948
mode 72 58.84 0.5074
mode 73 60.44 0.1840
mode 74 60.76 0.3817
mode 75 62.31 0.2494
mode 76 63.83 0.1697
mode 77 64.22 0.2748
mode 78 65.09 0.3350
mode 79 69.77 0.2532
mode 80 70.39 0.0765
mode 81 72.07 0.2147
mode 82 73.54 0.4824
mode 83 74.40 0.1298
mode 84 75.90 0.3164
mode 85 76.45 0.1603
mode 86 78.76 0.2411
mode 87 79.81 0.2785
mode 88 80.80 0.4867
mode 89 81.91 0.3411
mode 90 82.73 0.2036
mode 91 85.17 0.2579
mode 92 87.59 0.2099
mode 93 88.15 0.3820
mode 94 89.47 0.3054
mode 95 90.22 0.0951
mode 96 90.71 0.2429
mode 97 91.92 0.3420
mode 98 93.12 0.1201
mode 99 95.38 0.1383
mode 100 96.85 0.1318
mode 101 98.67 0.3516
mode 102 100.42 0.3612
mode 103 102.21 0.1433
mode 104 104.87 0.3029
mode 105 105.50 0.1277
mode 106 106.98 0.1532

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.