CNRS Nantes University US2B US2B
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***  Papaina  ***

Normal Mode Analysis for ID 2405231920152992360

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6483
mode 8 1.03 0.6307
mode 9 1.17 0.6180
mode 10 1.63 0.5841
mode 11 1.70 0.6700
mode 12 1.74 0.7456
mode 13 1.82 0.5912
mode 14 1.91 0.5167
mode 15 1.95 0.2321
mode 16 1.99 0.5170
mode 17 2.06 0.4638
mode 18 2.10 0.5038
mode 19 2.18 0.4642
mode 20 2.22 0.3685
mode 21 2.30 0.5424
mode 22 2.36 0.6436
mode 23 2.41 0.4699
mode 24 2.43 0.6517
mode 25 2.47 0.2736
mode 26 2.52 0.5026
mode 27 2.58 0.3516
mode 28 2.59 0.3216
mode 29 2.61 0.5725
mode 30 2.66 0.3693
mode 31 2.74 0.5203
mode 32 2.75 0.3651
mode 33 2.79 0.4423
mode 34 2.82 0.3716
mode 35 2.85 0.5115
mode 36 2.89 0.5396
mode 37 2.91 0.3935
mode 38 2.92 0.5439
mode 39 2.94 0.5624
mode 40 2.99 0.3546
mode 41 3.01 0.2274
mode 42 3.04 0.4389
mode 43 3.07 0.3068
mode 44 3.08 0.1267
mode 45 3.11 0.4252
mode 46 3.14 0.5477
mode 47 3.17 0.3691
mode 48 3.18 0.5597
mode 49 3.23 0.5635
mode 50 3.25 0.5105
mode 51 3.26 0.5275
mode 52 3.31 0.5507
mode 53 3.32 0.3455
mode 54 3.34 0.3857
mode 55 3.37 0.4430
mode 56 3.38 0.3895
mode 57 3.40 0.5038
mode 58 3.45 0.4575
mode 59 3.46 0.3232
mode 60 3.51 0.4075
mode 61 3.52 0.5932
mode 62 3.56 0.3688
mode 63 3.61 0.5685
mode 64 3.63 0.4631
mode 65 3.64 0.4023
mode 66 3.67 0.4913
mode 67 3.70 0.5329
mode 68 3.71 0.5148
mode 69 3.72 0.4173
mode 70 3.74 0.3696
mode 71 3.77 0.3677
mode 72 3.79 0.3792
mode 73 3.80 0.3885
mode 74 3.82 0.3707
mode 75 3.85 0.4692
mode 76 3.90 0.3731
mode 77 3.91 0.4835
mode 78 3.92 0.4506
mode 79 3.97 0.5258
mode 80 3.97 0.4337
mode 81 3.99 0.4255
mode 82 4.03 0.5499
mode 83 4.05 0.3485
mode 84 4.06 0.4554
mode 85 4.08 0.4857
mode 86 4.10 0.4446
mode 87 4.12 0.5169
mode 88 4.15 0.5077
mode 89 4.15 0.4460
mode 90 4.17 0.4226
mode 91 4.20 0.4451
mode 92 4.22 0.5604
mode 93 4.24 0.4916
mode 94 4.26 0.2896
mode 95 4.28 0.4328
mode 96 4.29 0.4524
mode 97 4.31 0.4753
mode 98 4.33 0.3585
mode 99 4.35 0.3667
mode 100 4.36 0.5300
mode 101 4.39 0.4404
mode 102 4.39 0.5469
mode 103 4.43 0.4665
mode 104 4.44 0.3681
mode 105 4.46 0.5087
mode 106 4.47 0.4433

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.