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Normal Mode Analysis for ID 23010914385880449

conformational change will be analysed

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: Rotation-translation modes have a cumulative overlap of 0.2320 !!! This probably means that the second conformation was not fitted properly onto the first one.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.4901 0.301 -147.7333
mode 8 1.28 0.5283 0.350 59.7538
mode 9 1.45 0.3549 0.482 97.5381
mode 10 1.81 0.2853 0.505 -40.6478
mode 11 1.89 0.2539 0.532 -45.0445
mode 12 1.93 0.1313 0.570 -52.0621
mode 13 2.26 0.1329 0.578 -24.3316
mode 14 2.39 0.3735 0.580 9.4018
mode 15 2.63 0.5306 0.661 -76.5337
mode 16 2.68 0.3525 0.661 8.5933
mode 17 2.69 0.5414 0.715 62.8573
mode 18 2.93 0.4735 0.717 -4.6167
mode 19 3.00 0.2948 0.753 -52.0416
mode 20 3.14 0.3676 0.772 37.3580
mode 21 3.22 0.7230 0.776 -16.6922
mode 22 3.25 0.3486 0.778 6.2539
mode 23 3.37 0.1764 0.778 -5.7792
mode 24 3.50 0.1027 0.778 -2.8970
mode 25 3.60 0.5341 0.795 36.2050
mode 26 3.63 0.1844 0.797 -4.7169
mode 27 3.76 0.5400 0.797 8.0656
mode 28 3.86 0.3974 0.798 4.7613
mode 29 3.93 0.4272 0.798 -4.0032
mode 30 3.97 0.2018 0.798 4.8889
mode 31 4.08 0.4938 0.800 -11.9553
mode 32 4.18 0.4385 0.801 5.0393
mode 33 4.21 0.3931 0.808 22.2268
mode 34 4.27 0.4568 0.813 -20.4619
mode 35 4.33 0.4585 0.819 -20.0714
mode 36 4.45 0.4514 0.825 22.3370
mode 37 4.47 0.5176 0.825 -0.3623
mode 38 4.49 0.3514 0.825 -4.7508
mode 39 4.58 0.6152 0.825 2.7967
mode 40 4.72 0.5510 0.827 -6.8114
mode 41 4.80 0.4640 0.827 1.9782
mode 42 4.90 0.5995 0.827 -1.7459
mode 43 5.01 0.3342 0.829 -12.8261
mode 44 5.05 0.1521 0.831 -11.5118
mode 45 5.07 0.5338 0.832 11.4356
mode 46 5.16 0.4562 0.836 -15.5601
mode 47 5.17 0.6465 0.838 -12.9792
mode 48 5.22 0.4022 0.839 -3.9201
mode 49 5.32 0.3219 0.839 -2.6537
mode 50 5.34 0.3766 0.839 2.3501
mode 51 5.37 0.4245 0.839 4.7004
mode 52 5.40 0.3718 0.840 9.2046
mode 53 5.45 0.5058 0.851 -27.7360
mode 54 5.49 0.4543 0.851 7.4091
mode 55 5.58 0.4127 0.852 -6.1309
mode 56 5.62 0.5823 0.852 1.4835
mode 57 5.63 0.4213 0.852 -2.3556
mode 58 5.68 0.5699 0.852 -4.9702
mode 59 5.72 0.1844 0.852 1.0443
mode 60 5.79 0.4917 0.852 -2.2028
mode 61 5.82 0.3670 0.852 0.0167
mode 62 5.86 0.5881 0.855 -13.5380
mode 63 5.87 0.4881 0.859 16.5847
mode 64 5.90 0.3880 0.859 6.2386
mode 65 5.95 0.3316 0.859 1.2644
mode 66 5.96 0.4381 0.859 3.3213
mode 67 6.05 0.5103 0.859 3.2165
mode 68 6.12 0.5772 0.859 1.7827
mode 69 6.14 0.4380 0.861 -7.2599
mode 70 6.18 0.4707 0.861 0.1055
mode 71 6.25 0.3086 0.862 11.2071
mode 72 6.26 0.4427 0.863 6.5746
mode 73 6.31 0.5114 0.863 -7.9913
mode 74 6.36 0.3846 0.863 -2.6489
mode 75 6.41 0.5150 0.865 -8.4126
mode 76 6.44 0.4270 0.866 9.3172
mode 77 6.45 0.3860 0.867 8.9991
mode 78 6.51 0.5146 0.867 1.7889
mode 79 6.56 0.4917 0.867 -3.5057
mode 80 6.61 0.5118 0.867 -0.8165
mode 81 6.64 0.4128 0.869 11.7030
mode 82 6.65 0.5233 0.870 5.6056
mode 83 6.69 0.5437 0.870 -0.9941
mode 84 6.77 0.4736 0.870 0.9528
mode 85 6.82 0.4345 0.870 3.4435
mode 86 6.84 0.5041 0.870 -2.8987
mode 87 6.87 0.3632 0.870 7.6918
mode 88 6.87 0.5693 0.870 -2.5821
mode 89 6.91 0.5128 0.871 -9.9270
mode 90 6.93 0.3961 0.873 6.1885
mode 91 6.97 0.4460 0.873 0.4799
mode 92 6.99 0.4493 0.874 8.7648
mode 93 7.00 0.4778 0.874 2.2477
mode 94 7.04 0.5426 0.874 0.2836
mode 95 7.10 0.3781 0.876 -9.1708
mode 96 7.13 0.4195 0.876 -3.7559
mode 97 7.17 0.4717 0.876 1.4658
mode 98 7.21 0.5203 0.876 8.1514
mode 99 7.24 0.4848 0.876 0.1791
mode 100 7.26 0.5420 0.877 -5.9157
mode 101 7.29 0.4587 0.877 2.5219
mode 102 7.32 0.4210 0.877 -4.4869
mode 103 7.34 0.4864 0.877 -0.5702
mode 104 7.37 0.4021 0.877 -5.5658
mode 105 7.39 0.3510 0.878 -4.5641
mode 106 7.41 0.4984 0.881 14.2147

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.