CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1fup-abcd  ***

Normal Mode Analysis for ID 23010419050363783

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5117
mode 8 1.03 0.5712
mode 9 1.22 0.1348
mode 10 1.26 0.1700
mode 11 1.30 0.2767
mode 12 1.31 0.3395
mode 13 1.38 0.4140
mode 14 1.43 0.2006
mode 15 1.50 0.2638
mode 16 1.55 0.4612
mode 17 1.61 0.3058
mode 18 1.61 0.6128
mode 19 1.72 0.2967
mode 20 1.93 0.3571
mode 21 1.99 0.6212
mode 22 2.01 0.2277
mode 23 2.09 0.1480
mode 24 2.14 0.2738
mode 25 2.16 0.5647
mode 26 2.35 0.3563
mode 27 2.44 0.6432
mode 28 2.51 0.4043
mode 29 2.54 0.2916
mode 30 2.60 0.4402
mode 31 2.61 0.6566
mode 32 2.69 0.6153
mode 33 2.76 0.6435
mode 34 2.78 0.4457
mode 35 2.80 0.5502
mode 36 2.94 0.5542
mode 37 2.99 0.3954
mode 38 3.12 0.6061
mode 39 3.13 0.6013
mode 40 3.28 0.4668
mode 41 3.29 0.4663
mode 42 3.35 0.5980
mode 43 3.37 0.5301
mode 44 3.46 0.5698
mode 45 3.55 0.5632
mode 46 3.56 0.4413
mode 47 3.62 0.5065
mode 48 3.73 0.5797
mode 49 3.77 0.2538
mode 50 3.79 0.4343
mode 51 3.88 0.4867
mode 52 4.02 0.4588
mode 53 4.07 0.4802
mode 54 4.10 0.5479
mode 55 4.16 0.4777
mode 56 4.18 0.4606
mode 57 4.22 0.4762
mode 58 4.22 0.5926
mode 59 4.29 0.4559
mode 60 4.37 0.4813
mode 61 4.39 0.6201
mode 62 4.44 0.5773
mode 63 4.50 0.5276
mode 64 4.52 0.3667
mode 65 4.57 0.4447
mode 66 4.60 0.4816
mode 67 4.63 0.5425
mode 68 4.67 0.5599
mode 69 4.70 0.6126
mode 70 4.72 0.4809
mode 71 4.72 0.5669
mode 72 4.76 0.4835
mode 73 4.80 0.6027
mode 74 4.86 0.5918
mode 75 4.91 0.6049
mode 76 4.92 0.3542
mode 77 5.07 0.3918
mode 78 5.07 0.2938
mode 79 5.10 0.4520
mode 80 5.13 0.4167
mode 81 5.16 0.5522
mode 82 5.20 0.5872
mode 83 5.21 0.5782
mode 84 5.23 0.5464
mode 85 5.30 0.5387
mode 86 5.35 0.5953
mode 87 5.40 0.4510
mode 88 5.47 0.6322
mode 89 5.49 0.6124
mode 90 5.55 0.6094
mode 91 5.63 0.6152
mode 92 5.65 0.6744
mode 93 5.65 0.4191
mode 94 5.66 0.5784
mode 95 5.71 0.5704
mode 96 5.71 0.5828
mode 97 5.83 0.6057
mode 98 5.85 0.6100
mode 99 5.94 0.5715
mode 100 5.94 0.5869
mode 101 5.95 0.5894
mode 102 5.98 0.3315
mode 103 6.00 0.5486
mode 104 6.05 0.2593
mode 105 6.09 0.6063
mode 106 6.13 0.5830

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.