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Normal Mode Analysis for ID 22121215131016185

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.2433
mode 8 1.09 0.1164
mode 9 1.16 0.2661
mode 10 1.48 0.3264
mode 11 1.56 0.0996
mode 12 1.92 0.2058
mode 13 2.01 0.3813
mode 14 2.09 0.3939
mode 15 2.19 0.3168
mode 16 2.21 0.5134
mode 17 2.34 0.3244
mode 18 2.41 0.3482
mode 19 2.53 0.4161
mode 20 2.57 0.2353
mode 21 2.62 0.2021
mode 22 2.70 0.4962
mode 23 2.70 0.2667
mode 24 2.79 0.2435
mode 25 2.83 0.2526
mode 26 2.85 0.4790
mode 27 2.91 0.3097
mode 28 2.95 0.2620
mode 29 2.98 0.1430
mode 30 3.09 0.5330
mode 31 3.12 0.3647
mode 32 3.13 0.4900
mode 33 3.21 0.5319
mode 34 3.24 0.3221
mode 35 3.28 0.5809
mode 36 3.32 0.2002
mode 37 3.38 0.2886
mode 38 3.41 0.4649
mode 39 3.46 0.1802
mode 40 3.48 0.3790
mode 41 3.49 0.2853
mode 42 3.57 0.2721
mode 43 3.63 0.3230
mode 44 3.64 0.2801
mode 45 3.69 0.1400
mode 46 3.72 0.3341
mode 47 3.74 0.3917
mode 48 3.78 0.3248
mode 49 3.82 0.3336
mode 50 3.87 0.4412
mode 51 3.88 0.3404
mode 52 3.93 0.3663
mode 53 3.96 0.1658
mode 54 4.01 0.3727
mode 55 4.03 0.4341
mode 56 4.05 0.3855
mode 57 4.08 0.3455
mode 58 4.11 0.3987
mode 59 4.14 0.4169
mode 60 4.17 0.3790
mode 61 4.18 0.4382
mode 62 4.25 0.2206
mode 63 4.27 0.2780
mode 64 4.28 0.3479
mode 65 4.30 0.3471
mode 66 4.34 0.4523
mode 67 4.35 0.4336
mode 68 4.37 0.3657
mode 69 4.39 0.3927
mode 70 4.43 0.3627
mode 71 4.44 0.3168
mode 72 4.46 0.2810
mode 73 4.47 0.2818
mode 74 4.50 0.3790
mode 75 4.53 0.2895
mode 76 4.54 0.0854
mode 77 4.55 0.1674
mode 78 4.56 0.3153
mode 79 4.58 0.1244
mode 80 4.59 0.2899
mode 81 4.63 0.1447
mode 82 4.63 0.3020
mode 83 4.67 0.2853
mode 84 4.70 0.3268
mode 85 4.71 0.2070
mode 86 4.74 0.3124
mode 87 4.76 0.3115
mode 88 4.77 0.3437
mode 89 4.79 0.2828
mode 90 4.81 0.2735
mode 91 4.83 0.4702
mode 92 4.84 0.1423
mode 93 4.84 0.3861
mode 94 4.87 0.2903
mode 95 4.89 0.1724
mode 96 4.93 0.3625
mode 97 4.94 0.3259
mode 98 4.95 0.3556
mode 99 4.99 0.4235
mode 100 4.99 0.3014
mode 101 5.02 0.2274
mode 102 5.05 0.3728
mode 103 5.06 0.2906
mode 104 5.08 0.3830
mode 105 5.10 0.2649
mode 106 5.11 0.1490

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.