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***  TRANSFERASE/RNA 05-DEC-14 4RWN  ***

Normal Mode Analysis for ID 221128153433140407

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5391
mode 8 1.09 0.5292
mode 9 1.35 0.1882
mode 10 1.45 0.1830
mode 11 1.52 0.2538
mode 12 1.59 0.4421
mode 13 1.74 0.1125
mode 14 1.77 0.0094
mode 15 1.85 0.3666
mode 16 2.04 0.2556
mode 17 2.05 0.4776
mode 18 2.18 0.6031
mode 19 2.24 0.3127
mode 20 2.31 0.2184
mode 21 2.44 0.5761
mode 22 2.48 0.3454
mode 23 2.54 0.4141
mode 24 2.60 0.4842
mode 25 2.68 0.3192
mode 26 2.70 0.3403
mode 27 2.79 0.1163
mode 28 2.82 0.4513
mode 29 2.89 0.2347
mode 30 3.03 0.3030
mode 31 3.03 0.4162
mode 32 3.08 0.4330
mode 33 3.09 0.3707
mode 34 3.16 0.0834
mode 35 3.25 0.1279
mode 36 3.35 0.6057
mode 37 3.41 0.4456
mode 38 3.43 0.4678
mode 39 3.52 0.4176
mode 40 3.55 0.1940
mode 41 3.57 0.2526
mode 42 3.68 0.1608
mode 43 3.72 0.3661
mode 44 3.77 0.4862
mode 45 3.79 0.3476
mode 46 3.83 0.3767
mode 47 3.87 0.4319
mode 48 3.94 0.4120
mode 49 3.98 0.3822
mode 50 4.03 0.3306
mode 51 4.06 0.2733
mode 52 4.10 0.4874
mode 53 4.13 0.4946
mode 54 4.19 0.5831
mode 55 4.27 0.4772
mode 56 4.30 0.3875
mode 57 4.33 0.4802
mode 58 4.39 0.2659
mode 59 4.42 0.4145
mode 60 4.45 0.3788
mode 61 4.48 0.2004
mode 62 4.52 0.1535
mode 63 4.54 0.4122
mode 64 4.58 0.2347
mode 65 4.59 0.4160
mode 66 4.60 0.2715
mode 67 4.66 0.3905
mode 68 4.68 0.2067
mode 69 4.72 0.4017
mode 70 4.78 0.4443
mode 71 4.79 0.4798
mode 72 4.83 0.4235
mode 73 4.86 0.3836
mode 74 4.94 0.3740
mode 75 4.97 0.4172
mode 76 4.99 0.4096
mode 77 5.03 0.3589
mode 78 5.06 0.2974
mode 79 5.08 0.3718
mode 80 5.09 0.2944
mode 81 5.16 0.3632
mode 82 5.19 0.3556
mode 83 5.20 0.4047
mode 84 5.23 0.4143
mode 85 5.26 0.3338
mode 86 5.30 0.4236
mode 87 5.30 0.3978
mode 88 5.33 0.4325
mode 89 5.36 0.4344
mode 90 5.39 0.4303
mode 91 5.42 0.4107
mode 92 5.45 0.3384
mode 93 5.47 0.3124
mode 94 5.49 0.4615
mode 95 5.52 0.5129
mode 96 5.55 0.4173
mode 97 5.60 0.5054
mode 98 5.63 0.5105
mode 99 5.65 0.4065
mode 100 5.67 0.3561
mode 101 5.72 0.4191
mode 102 5.76 0.3631
mode 103 5.80 0.4460
mode 104 5.80 0.4013
mode 105 5.86 0.4062
mode 106 5.90 0.4036

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.