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***  pigments2  ***

Normal Mode Analysis for ID 22110512522071667

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7247
mode 8 1.14 0.6115
mode 9 1.55 0.5637
mode 10 1.94 0.2203
mode 11 2.03 0.2496
mode 12 2.25 0.4054
mode 13 2.38 0.4012
mode 14 2.75 0.5610
mode 15 2.77 0.3336
mode 16 2.93 0.4278
mode 17 3.23 0.5581
mode 18 3.58 0.5691
mode 19 3.62 0.5328
mode 20 3.71 0.5588
mode 21 3.87 0.5442
mode 22 4.02 0.2707
mode 23 4.12 0.7062
mode 24 4.23 0.5278
mode 25 4.33 0.5653
mode 26 4.46 0.4936
mode 27 4.55 0.5926
mode 28 4.64 0.5150
mode 29 4.73 0.7075
mode 30 4.85 0.7022
mode 31 4.92 0.6163
mode 32 5.02 0.6907
mode 33 5.18 0.6816
mode 34 5.30 0.6527
mode 35 5.30 0.6269
mode 36 5.41 0.6197
mode 37 5.50 0.6129
mode 38 5.56 0.6270
mode 39 5.58 0.6545
mode 40 5.64 0.6631
mode 41 5.67 0.5570
mode 42 5.77 0.5675
mode 43 5.86 0.6170
mode 44 5.90 0.5703
mode 45 6.02 0.6846
mode 46 6.07 0.7038
mode 47 6.09 0.5508
mode 48 6.20 0.6005
mode 49 6.35 0.6040
mode 50 6.44 0.6213
mode 51 6.56 0.5952
mode 52 6.76 0.4730
mode 53 6.93 0.4036
mode 54 7.08 0.5137
mode 55 7.17 0.4101
mode 56 7.39 0.4276
mode 57 7.45 0.4434
mode 58 7.57 0.5228
mode 59 7.73 0.3663
mode 60 8.21 0.2338

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.