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Normal Mode Analysis for ID 2210061134239865

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0393
mode 8 1.36 0.2939
mode 9 1.54 0.2918
mode 10 1.63 0.1526
mode 11 1.86 0.6179
mode 12 2.30 0.3880
mode 13 2.41 0.3593
mode 14 2.59 0.3045
mode 15 2.73 0.3449
mode 16 2.81 0.2577
mode 17 2.87 0.5236
mode 18 3.03 0.6578
mode 19 3.10 0.5694
mode 20 3.25 0.4277
mode 21 3.39 0.4431
mode 22 3.65 0.4408
mode 23 3.75 0.3115
mode 24 3.85 0.2214
mode 25 3.92 0.3536
mode 26 4.04 0.4188
mode 27 4.08 0.4794
mode 28 4.15 0.4185
mode 29 4.20 0.5207
mode 30 4.29 0.4624
mode 31 4.40 0.5811
mode 32 4.47 0.5088
mode 33 4.51 0.4080
mode 34 4.52 0.5957
mode 35 4.64 0.4903
mode 36 4.75 0.6487
mode 37 4.80 0.5316
mode 38 4.87 0.4817
mode 39 5.03 0.3381
mode 40 5.06 0.5097
mode 41 5.14 0.5487
mode 42 5.17 0.4079
mode 43 5.26 0.5756
mode 44 5.29 0.3929
mode 45 5.36 0.3750
mode 46 5.43 0.4240
mode 47 5.50 0.3855
mode 48 5.51 0.5642
mode 49 5.62 0.3406
mode 50 5.66 0.5303
mode 51 5.71 0.3574
mode 52 5.77 0.4866
mode 53 5.86 0.4871
mode 54 5.91 0.3400
mode 55 5.94 0.3454
mode 56 5.98 0.1922
mode 57 6.10 0.4066
mode 58 6.11 0.4001
mode 59 6.15 0.2228
mode 60 6.26 0.4275
mode 61 6.33 0.5475
mode 62 6.34 0.4745
mode 63 6.44 0.5303
mode 64 6.51 0.4871
mode 65 6.54 0.4165
mode 66 6.62 0.4553
mode 67 6.64 0.4661
mode 68 6.67 0.4778
mode 69 6.69 0.5323
mode 70 6.77 0.5979
mode 71 6.79 0.5599
mode 72 6.85 0.5000
mode 73 6.90 0.5524
mode 74 6.95 0.5109
mode 75 7.01 0.6383
mode 76 7.06 0.5061
mode 77 7.15 0.5599
mode 78 7.18 0.5545
mode 79 7.22 0.4069
mode 80 7.26 0.5472
mode 81 7.31 0.5039
mode 82 7.34 0.4109
mode 83 7.36 0.3800
mode 84 7.37 0.3667
mode 85 7.47 0.3705
mode 86 7.52 0.5493
mode 87 7.57 0.5395
mode 88 7.58 0.5355
mode 89 7.60 0.4151
mode 90 7.66 0.4340
mode 91 7.68 0.3743
mode 92 7.75 0.2431
mode 93 7.81 0.4860
mode 94 7.84 0.5202
mode 95 7.85 0.3585
mode 96 7.88 0.4076
mode 97 7.91 0.3817
mode 98 7.96 0.3724
mode 99 7.99 0.4880
mode 100 8.06 0.4446
mode 101 8.12 0.4194
mode 102 8.16 0.4723
mode 103 8.21 0.4638
mode 104 8.23 0.4525
mode 105 8.25 0.4484
mode 106 8.29 0.4305

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.