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***  OXIDOREDUCTASE 19-DEC-00 1HQS  ***

Normal Mode Analysis for ID 22100401305057753

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5607
mode 8 1.08 0.4121
mode 9 1.11 0.4477
mode 10 1.25 0.3301
mode 11 1.35 0.3271
mode 12 1.49 0.3254
mode 13 1.54 0.3834
mode 14 1.69 0.2379
mode 15 1.90 0.4563
mode 16 1.94 0.3360
mode 17 2.04 0.2771
mode 18 2.05 0.4213
mode 19 2.19 0.5740
mode 20 2.30 0.1761
mode 21 2.47 0.4940
mode 22 2.53 0.4560
mode 23 2.57 0.4165
mode 24 2.58 0.3761
mode 25 2.79 0.3742
mode 26 2.80 0.3830
mode 27 2.86 0.3643
mode 28 2.94 0.3481
mode 29 2.97 0.4482
mode 30 3.06 0.3356
mode 31 3.08 0.4519
mode 32 3.11 0.1416
mode 33 3.19 0.5539
mode 34 3.24 0.2240
mode 35 3.34 0.4429
mode 36 3.39 0.2366
mode 37 3.46 0.3875
mode 38 3.56 0.4938
mode 39 3.65 0.6009
mode 40 3.69 0.5508
mode 41 3.75 0.6002
mode 42 3.79 0.4974
mode 43 3.84 0.2813
mode 44 3.95 0.3210
mode 45 4.00 0.1500
mode 46 4.07 0.3485
mode 47 4.13 0.5210
mode 48 4.14 0.5109
mode 49 4.18 0.2924
mode 50 4.27 0.3445
mode 51 4.34 0.4407
mode 52 4.35 0.5244
mode 53 4.40 0.3725
mode 54 4.46 0.5165
mode 55 4.50 0.5127
mode 56 4.55 0.5276
mode 57 4.57 0.5317
mode 58 4.60 0.5410
mode 59 4.63 0.5627
mode 60 4.66 0.3017
mode 61 4.72 0.3860
mode 62 4.79 0.3758
mode 63 4.86 0.5479
mode 64 4.94 0.5285
mode 65 4.97 0.4402
mode 66 4.99 0.1818
mode 67 5.03 0.5066
mode 68 5.04 0.4308
mode 69 5.06 0.4615
mode 70 5.08 0.5843
mode 71 5.15 0.3517
mode 72 5.20 0.5562
mode 73 5.22 0.2262
mode 74 5.28 0.4175
mode 75 5.33 0.5336
mode 76 5.38 0.4044
mode 77 5.42 0.5657
mode 78 5.45 0.4421
mode 79 5.48 0.4535
mode 80 5.51 0.5517
mode 81 5.55 0.5173
mode 82 5.56 0.3524
mode 83 5.59 0.4711
mode 84 5.61 0.4828
mode 85 5.64 0.4820
mode 86 5.67 0.4905
mode 87 5.71 0.4979
mode 88 5.72 0.3668
mode 89 5.77 0.5820
mode 90 5.80 0.4881
mode 91 5.83 0.4403
mode 92 5.86 0.5627
mode 93 5.88 0.3297
mode 94 5.89 0.4605
mode 95 5.94 0.5562
mode 96 5.98 0.5740
mode 97 6.00 0.4729
mode 98 6.06 0.4424
mode 99 6.09 0.5038
mode 100 6.09 0.6323
mode 101 6.13 0.5232
mode 102 6.15 0.5133
mode 103 6.19 0.4124
mode 104 6.22 0.4962
mode 105 6.24 0.3539
mode 106 6.26 0.5212

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.