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***  LYASE/RNA 29-JUN-11 3SNP  ***

Normal Mode Analysis for ID 22100319494474332

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5550
mode 8 1.59 0.5562
mode 9 2.01 0.5994
mode 10 2.43 0.5981
mode 11 2.96 0.6516
mode 12 3.28 0.7053
mode 13 4.12 0.6490
mode 14 4.61 0.6977
mode 15 4.95 0.4785
mode 16 5.03 0.6923
mode 17 5.33 0.6636
mode 18 5.77 0.6483
mode 19 6.12 0.4471
mode 20 6.23 0.5983
mode 21 6.51 0.4394
mode 22 6.65 0.0974
mode 23 6.92 0.2337
mode 24 7.12 0.4495
mode 25 7.54 0.4222
mode 26 7.85 0.4584
mode 27 8.02 0.5618
mode 28 8.46 0.2590
mode 29 8.48 0.2832
mode 30 8.62 0.4320
mode 31 8.77 0.4754
mode 32 8.96 0.4753
mode 33 9.18 0.4642
mode 34 9.27 0.5192
mode 35 9.30 0.5573
mode 36 9.56 0.4382
mode 37 9.77 0.5560
mode 38 9.98 0.2785
mode 39 10.05 0.3331
mode 40 10.13 0.2343
mode 41 10.17 0.5144
mode 42 10.27 0.3028
mode 43 10.39 0.3316
mode 44 10.45 0.1708
mode 45 10.59 0.5424
mode 46 10.71 0.4796
mode 47 10.76 0.4230
mode 48 10.93 0.5746
mode 49 11.08 0.4339
mode 50 11.21 0.4118
mode 51 11.33 0.5076
mode 52 11.44 0.4629
mode 53 11.65 0.3818
mode 54 11.71 0.4654
mode 55 11.85 0.4157
mode 56 11.91 0.4800
mode 57 11.96 0.5612
mode 58 12.07 0.6269
mode 59 12.22 0.4201
mode 60 12.27 0.4596
mode 61 12.31 0.5372
mode 62 12.47 0.5117
mode 63 12.59 0.4846
mode 64 12.65 0.4797
mode 65 12.68 0.5268
mode 66 12.82 0.5713
mode 67 12.88 0.5229
mode 68 13.02 0.4905
mode 69 13.10 0.5406
mode 70 13.15 0.4579
mode 71 13.30 0.5787
mode 72 13.40 0.4574
mode 73 13.48 0.4275
mode 74 13.68 0.5199
mode 75 13.72 0.4898
mode 76 13.76 0.4788
mode 77 13.90 0.5459
mode 78 13.94 0.5005
mode 79 14.00 0.5356
mode 80 14.07 0.4882
mode 81 14.19 0.5090
mode 82 14.25 0.5454
mode 83 14.31 0.4861
mode 84 14.36 0.5093
mode 85 14.45 0.5076
mode 86 14.54 0.4618
mode 87 14.60 0.5709
mode 88 14.70 0.4917
mode 89 14.77 0.3217
mode 90 14.81 0.3904
mode 91 14.86 0.2698
mode 92 14.99 0.4606
mode 93 15.00 0.3306
mode 94 15.10 0.4091
mode 95 15.16 0.4270
mode 96 15.22 0.5335
mode 97 15.30 0.1874
mode 98 15.39 0.3457
mode 99 15.46 0.4246
mode 100 15.54 0.5114
mode 101 15.58 0.5521
mode 102 15.64 0.3788
mode 103 15.70 0.4789
mode 104 15.77 0.3639
mode 105 15.85 0.4112
mode 106 15.87 0.4720

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.