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***  proz_dps_dpe  ***

Normal Mode Analysis for ID 2208130311222098

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1163
mode 8 1.13 0.0969
mode 9 1.51 0.0360
mode 10 3.94 0.1156
mode 11 4.69 0.3642
mode 12 5.06 0.1611
mode 13 5.44 0.3960
mode 14 5.78 0.4494
mode 15 6.33 0.3089
mode 16 7.16 0.2222
mode 17 7.75 0.3144
mode 18 8.07 0.3055
mode 19 8.75 0.0262
mode 20 8.86 0.4414
mode 21 9.35 0.3071
mode 22 9.81 0.4876
mode 23 9.89 0.4405
mode 24 10.16 0.2087
mode 25 10.42 0.0581
mode 26 10.51 0.2091
mode 27 10.71 0.3756
mode 28 11.18 0.3223
mode 29 11.52 0.5052
mode 30 11.61 0.1150
mode 31 11.82 0.2530
mode 32 11.95 0.2777
mode 33 12.05 0.3307
mode 34 12.33 0.1711
mode 35 12.42 0.2568
mode 36 12.49 0.2658
mode 37 12.86 0.1476
mode 38 13.02 0.2673
mode 39 13.22 0.1171
mode 40 13.50 0.5468
mode 41 13.57 0.1912
mode 42 13.83 0.0811
mode 43 14.04 0.4910
mode 44 14.22 0.4172
mode 45 14.27 0.2523
mode 46 14.71 0.3616
mode 47 14.74 0.0529
mode 48 14.83 0.2519
mode 49 15.01 0.2360
mode 50 15.06 0.5025
mode 51 15.16 0.2792
mode 52 15.35 0.0323
mode 53 15.36 0.5511
mode 54 15.48 0.5709
mode 55 15.61 0.4522
mode 56 15.66 0.4467
mode 57 15.87 0.4734
mode 58 15.97 0.0457
mode 59 16.15 0.4480
mode 60 16.28 0.1871
mode 61 16.31 0.2229
mode 62 16.42 0.0382
mode 63 16.56 0.4154
mode 64 16.66 0.2335
mode 65 16.80 0.3883
mode 66 16.86 0.3667
mode 67 16.90 0.3012
mode 68 17.07 0.3519
mode 69 17.29 0.0805
mode 70 17.36 0.4594
mode 71 17.51 0.4308
mode 72 17.58 0.1267
mode 73 17.64 0.5004
mode 74 17.67 0.2826
mode 75 17.83 0.3992
mode 76 18.05 0.4737
mode 77 18.15 0.3231
mode 78 18.26 0.3957
mode 79 18.40 0.3495
mode 80 18.44 0.3084
mode 81 18.64 0.1291
mode 82 18.72 0.2144
mode 83 18.79 0.1103
mode 84 18.91 0.2844
mode 85 18.98 0.3498
mode 86 19.05 0.5064
mode 87 19.18 0.4308
mode 88 19.21 0.4965
mode 89 19.33 0.1703
mode 90 19.35 0.4171
mode 91 19.46 0.3062
mode 92 19.52 0.3301
mode 93 19.60 0.1872
mode 94 19.73 0.3816
mode 95 19.86 0.3449
mode 96 19.91 0.4018
mode 97 19.98 0.4836
mode 98 20.02 0.4721
mode 99 20.06 0.4076
mode 100 20.27 0.4500
mode 101 20.33 0.3633
mode 102 20.45 0.3569
mode 103 20.48 0.5121
mode 104 20.58 0.5118
mode 105 20.66 0.4097
mode 106 20.76 0.4465

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.