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Normal Mode Analysis for ID 22062211422855121

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 3 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.3960
mode 8 1.13 0.0246
mode 9 1.50 0.0323
mode 10 1.67 0.2528
mode 11 2.00 0.0996
mode 12 2.08 0.0528
mode 13 2.29 0.1162
mode 14 2.68 0.5295
mode 15 3.95 0.0293
mode 16 4.49 0.1938
mode 17 4.71 0.3799
mode 18 5.43 0.3290
mode 19 5.74 0.0197
mode 20 5.99 0.0862
mode 21 6.18 0.6433
mode 22 6.36 0.0444
mode 23 6.67 0.0602
mode 24 6.73 0.0216
mode 25 7.34 0.0581
mode 26 7.67 0.0533
mode 27 8.18 0.0179
mode 28 8.99 0.0578
mode 29 9.57 0.2321
mode 30 9.66 0.1945
mode 31 10.03 0.3826
mode 32 10.31 0.0512
mode 33 10.45 0.4626
mode 34 11.09 0.0851
mode 35 11.27 0.1770
mode 36 11.50 0.1152
mode 37 12.32 0.0207
mode 38 12.43 0.2074
mode 39 12.61 0.4477
mode 40 12.90 0.0213
mode 41 13.58 0.0504
mode 42 13.86 0.2579
mode 43 14.13 0.0514
mode 44 14.18 0.2106
mode 45 14.53 0.1463
mode 46 14.75 0.3448
mode 47 15.33 0.2834
mode 48 15.73 0.1235
mode 49 15.94 0.1794
mode 50 16.20 0.1131
mode 51 16.61 0.2007
mode 52 16.79 0.2872
mode 53 17.19 0.3131
mode 54 17.56 0.2933
mode 55 17.73 0.1877
mode 56 17.76 0.2294
mode 57 18.23 0.1975
mode 58 18.47 0.2421
mode 59 18.74 0.3191
mode 60 18.87 0.2160
mode 61 19.11 0.2344
mode 62 19.37 0.0951
mode 63 19.52 0.4277
mode 64 19.73 0.3127
mode 65 20.05 0.2378
mode 66 20.54 0.3843
mode 67 20.70 0.2901
mode 68 21.03 0.4192
mode 69 21.09 0.1308
mode 70 21.17 0.0507
mode 71 21.36 0.2809
mode 72 21.49 0.3179
mode 73 21.79 0.3202
mode 74 22.02 0.2773
mode 75 22.27 0.1993
mode 76 22.35 0.4017
mode 77 22.90 0.1210
mode 78 23.09 0.1898
mode 79 23.22 0.3402
mode 80 23.48 0.4553
mode 81 23.49 0.2603
mode 82 23.60 0.1712
mode 83 23.86 0.2960
mode 84 24.00 0.1084
mode 85 24.17 0.1857
mode 86 24.26 0.1568
mode 87 24.46 0.2502
mode 88 24.80 0.2319
mode 89 24.88 0.2846
mode 90 25.07 0.2998
mode 91 25.38 0.2302
mode 92 25.54 0.3799
mode 93 25.64 0.1601
mode 94 25.96 0.2962
mode 95 26.02 0.2140
mode 96 26.14 0.2566
mode 97 26.33 0.0546
mode 98 26.56 0.0561
mode 99 26.64 0.4107
mode 100 26.80 0.3134
mode 101 27.19 0.4477
mode 102 27.53 0.4367
mode 103 27.79 0.2679
mode 104 27.96 0.4105
mode 105 28.07 0.4252
mode 106 28.32 0.3755

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.