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Normal Mode Analysis for ID 220519111826145740

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 3 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0416
mode 8 1.18 0.0540
mode 9 3.38 0.4141
mode 10 3.57 0.3310
mode 11 3.84 0.0332
mode 12 4.35 0.4390
mode 13 4.67 0.3096
mode 14 5.05 0.2713
mode 15 6.82 0.5601
mode 16 7.26 0.3835
mode 17 7.38 0.5500
mode 18 8.26 0.4688
mode 19 8.59 0.2222
mode 20 8.84 0.4623
mode 21 8.89 0.4051
mode 22 9.45 0.2913
mode 23 9.58 0.0454
mode 24 9.76 0.4082
mode 25 10.07 0.0740
mode 26 10.30 0.2619
mode 27 10.45 0.2722
mode 28 10.66 0.3022
mode 29 11.11 0.3055
mode 30 11.30 0.3802
mode 31 11.50 0.3364
mode 32 11.69 0.4517
mode 33 11.82 0.3029
mode 34 12.13 0.3618
mode 35 12.24 0.1157
mode 36 12.45 0.2997
mode 37 12.46 0.1183
mode 38 12.75 0.2281
mode 39 13.06 0.4691
mode 40 13.62 0.4462
mode 41 13.90 0.3670
mode 42 14.15 0.4665
mode 43 14.17 0.5002
mode 44 14.43 0.1639
mode 45 14.61 0.5250
mode 46 14.72 0.4097
mode 47 15.02 0.4135
mode 48 15.32 0.4236
mode 49 15.60 0.3690
mode 50 15.87 0.4807
mode 51 16.23 0.2657
mode 52 16.26 0.3293
mode 53 16.50 0.0815
mode 54 16.70 0.2988
mode 55 16.77 0.2790
mode 56 16.86 0.3002
mode 57 16.93 0.2538
mode 58 17.00 0.3997
mode 59 17.06 0.4795
mode 60 17.27 0.3879
mode 61 17.34 0.2474
mode 62 17.46 0.4544
mode 63 17.72 0.3842
mode 64 17.86 0.5057
mode 65 18.06 0.4491
mode 66 18.27 0.3980
mode 67 18.45 0.4961
mode 68 18.67 0.3238
mode 69 18.93 0.4471
mode 70 19.05 0.4697
mode 71 19.12 0.4122
mode 72 19.22 0.3005
mode 73 19.38 0.3735
mode 74 19.59 0.4894
mode 75 19.61 0.4513
mode 76 19.87 0.3846
mode 77 20.01 0.3568
mode 78 20.09 0.3818
mode 79 20.21 0.4424
mode 80 20.39 0.4323
mode 81 20.53 0.4227
mode 82 20.74 0.4686
mode 83 20.82 0.5004
mode 84 20.97 0.3272
mode 85 21.04 0.3875
mode 86 21.16 0.4575
mode 87 21.24 0.4329
mode 88 21.34 0.4206
mode 89 21.45 0.4048
mode 90 21.70 0.3029
mode 91 21.85 0.3512
mode 92 21.93 0.3777
mode 93 22.17 0.4508
mode 94 22.23 0.3838
mode 95 22.41 0.3386
mode 96 22.53 0.3071
mode 97 22.71 0.3294
mode 98 22.78 0.5202
mode 99 22.81 0.4998
mode 100 22.93 0.3219
mode 101 23.20 0.3981
mode 102 23.33 0.3500
mode 103 23.39 0.3262
mode 104 23.58 0.3274
mode 105 23.69 0.2321
mode 106 23.80 0.3904

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.