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***  A0A097ZLP  ***

Normal Mode Analysis for ID 22050700025026931

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 5 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0523
mode 8 1.31 0.0233
mode 9 3.14 0.0267
mode 10 3.47 0.0357
mode 11 7.90 0.0414
mode 12 9.53 0.0325
mode 13 11.34 0.0444
mode 14 16.98 0.0228
mode 15 19.80 0.0297
mode 16 21.26 0.0195
mode 17 30.15 0.5978
mode 18 30.66 0.5408
mode 19 32.68 0.0372
mode 20 37.98 0.0333
mode 21 39.00 0.5777
mode 22 41.86 0.0255
mode 23 48.63 0.0524
mode 24 49.54 0.0720
mode 25 49.79 0.0888
mode 26 50.42 0.0225
mode 27 51.88 0.2423
mode 28 53.49 0.3320
mode 29 54.13 0.0373
mode 30 56.00 0.5150
mode 31 59.47 0.5282
mode 32 60.24 0.3513
mode 33 60.99 0.0588
mode 34 63.29 0.0724
mode 35 64.00 0.0342
mode 36 66.17 0.3696
mode 37 68.77 0.3075
mode 38 70.40 0.1207
mode 39 70.65 0.2846
mode 40 72.58 0.0035
mode 41 74.62 0.2212
mode 42 75.42 0.1318
mode 43 76.37 0.1457
mode 44 77.75 0.2037
mode 45 78.35 0.1425
mode 46 78.92 0.3273
mode 47 79.32 0.1940
mode 48 80.76 0.2517
mode 49 81.05 0.2949
mode 50 82.27 0.3113
mode 51 82.90 0.1763
mode 52 85.27 0.4819
mode 53 86.00 0.4243
mode 54 86.80 0.1782
mode 55 88.16 0.3001
mode 56 88.71 0.1310
mode 57 90.03 0.4782
mode 58 90.71 0.4316
mode 59 91.33 0.5689
mode 60 92.17 0.3873
mode 61 93.53 0.3353
mode 62 95.85 0.5032
mode 63 97.24 0.4525
mode 64 99.33 0.3506
mode 65 100.78 0.0311
mode 66 101.23 0.3193
mode 67 102.10 0.2193
mode 68 102.48 0.3301
mode 69 103.39 0.4145
mode 70 104.79 0.4834
mode 71 106.85 0.3220
mode 72 107.32 0.2581
mode 73 107.65 0.3509
mode 74 109.54 0.0320
mode 75 110.48 0.4860
mode 76 110.98 0.3328
mode 77 111.61 0.3532
mode 78 113.59 0.3078
mode 79 114.39 0.4563
mode 80 115.79 0.4243
mode 81 116.72 0.4630
mode 82 117.11 0.0338
mode 83 117.45 0.3645
mode 84 118.16 0.1515
mode 85 118.73 0.3648
mode 86 120.49 0.1972
mode 87 120.82 0.3786
mode 88 122.83 0.1327
mode 89 123.20 0.1588
mode 90 123.59 0.1871
mode 91 124.32 0.3195
mode 92 124.78 0.4952
mode 93 126.84 0.3330
mode 94 128.46 0.3134
mode 95 130.10 0.5252
mode 96 131.05 0.3028
mode 97 131.65 0.4040
mode 98 131.73 0.4935
mode 99 132.40 0.0824
mode 100 133.17 0.3068
mode 101 134.00 0.4363
mode 102 134.24 0.3628
mode 103 135.25 0.3614
mode 104 137.05 0.4881
mode 105 137.57 0.2912
mode 106 138.38 0.3405

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.