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***  dndCD  ***

Normal Mode Analysis for ID 2205041037174332

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4061
mode 8 1.37 0.5163
mode 9 3.15 0.5236
mode 10 4.13 0.4196
mode 11 6.20 0.2635
mode 12 6.55 0.1817
mode 13 7.53 0.7172
mode 14 8.01 0.6318
mode 15 9.79 0.6047
mode 16 12.41 0.6953
mode 17 13.53 0.2535
mode 18 14.11 0.3642
mode 19 15.11 0.4274
mode 20 17.39 0.4663
mode 21 19.02 0.6151
mode 22 20.81 0.7071
mode 23 24.53 0.5420
mode 24 25.05 0.4518
mode 25 26.58 0.3949
mode 26 29.57 0.2658
mode 27 31.00 0.6275
mode 28 32.62 0.2897
mode 29 34.78 0.6517
mode 30 35.73 0.3438
mode 31 37.70 0.4402
mode 32 39.53 0.3849
mode 33 41.02 0.5875
mode 34 41.74 0.3718
mode 35 43.95 0.5801
mode 36 45.41 0.5533
mode 37 45.79 0.5241
mode 38 48.14 0.5441
mode 39 49.75 0.3482
mode 40 51.03 0.4490
mode 41 53.17 0.5189
mode 42 54.04 0.5025
mode 43 55.56 0.5701
mode 44 57.24 0.3968
mode 45 58.56 0.3888
mode 46 58.96 0.5727
mode 47 61.28 0.4828
mode 48 63.08 0.3120
mode 49 64.60 0.3560
mode 50 65.28 0.4330
mode 51 65.66 0.3606
mode 52 67.07 0.4499
mode 53 68.10 0.5395
mode 54 69.29 0.2928
mode 55 70.63 0.5616
mode 56 72.60 0.2901
mode 57 73.00 0.2063
mode 58 73.78 0.3227
mode 59 74.19 0.3230
mode 60 74.92 0.4146
mode 61 75.12 0.2320
mode 62 76.21 0.3154
mode 63 76.83 0.2455
mode 64 79.25 0.2662
mode 65 79.46 0.3134
mode 66 80.54 0.2958
mode 67 81.04 0.5554
mode 68 81.67 0.3918
mode 69 82.66 0.3087
mode 70 83.21 0.1773
mode 71 84.28 0.2499
mode 72 84.60 0.3533
mode 73 85.70 0.3239
mode 74 86.47 0.3066
mode 75 87.10 0.5200
mode 76 88.51 0.5264
mode 77 89.27 0.2822
mode 78 90.23 0.4968
mode 79 91.97 0.2987
mode 80 93.84 0.4525
mode 81 94.15 0.3731
mode 82 95.25 0.5460
mode 83 95.77 0.3694
mode 84 96.84 0.4457
mode 85 98.19 0.5544
mode 86 99.34 0.5774
mode 87 99.49 0.2768
mode 88 99.86 0.4620
mode 89 101.44 0.4790
mode 90 101.62 0.3182
mode 91 103.04 0.1457
mode 92 103.54 0.3211
mode 93 104.33 0.4934
mode 94 105.76 0.4228
mode 95 106.35 0.3760
mode 96 107.64 0.4309
mode 97 107.97 0.4438
mode 98 109.23 0.3174
mode 99 109.44 0.4373
mode 100 109.66 0.3580
mode 101 111.31 0.4187
mode 102 112.00 0.3385
mode 103 112.51 0.3848
mode 104 113.15 0.4550
mode 105 113.66 0.3761
mode 106 114.75 0.3978

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.