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***  dndD  ***

Normal Mode Analysis for ID 22050408112993371

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6376
mode 8 1.18 0.6669
mode 9 1.27 0.7589
mode 10 1.94 0.6995
mode 11 4.47 0.6796
mode 12 4.58 0.4016
mode 13 5.23 0.2588
mode 14 6.46 0.4870
mode 15 7.79 0.5092
mode 16 10.62 0.4834
mode 17 10.86 0.4347
mode 18 13.93 0.4688
mode 19 16.78 0.4201
mode 20 17.54 0.4964
mode 21 19.91 0.3243
mode 22 20.99 0.2800
mode 23 23.63 0.4457
mode 24 25.63 0.4094
mode 25 26.51 0.2751
mode 26 28.69 0.4746
mode 27 29.41 0.3239
mode 28 31.09 0.0243
mode 29 33.02 0.5034
mode 30 33.50 0.4642
mode 31 34.09 0.4396
mode 32 36.49 0.4440
mode 33 37.69 0.3234
mode 34 38.37 0.4064
mode 35 39.88 0.4653
mode 36 41.50 0.1555
mode 37 42.39 0.4758
mode 38 44.06 0.5274
mode 39 45.44 0.2589
mode 40 46.45 0.2085
mode 41 47.40 0.2846
mode 42 48.04 0.4554
mode 43 51.03 0.4740
mode 44 51.38 0.5235
mode 45 52.25 0.4516
mode 46 52.92 0.4482
mode 47 55.46 0.3761
mode 48 55.81 0.1424
mode 49 57.26 0.2628
mode 50 59.35 0.4843
mode 51 59.53 0.4111
mode 52 59.98 0.4734
mode 53 61.30 0.1318
mode 54 61.76 0.2815
mode 55 62.18 0.2557
mode 56 64.29 0.3442
mode 57 64.83 0.4621
mode 58 65.75 0.4900
mode 59 67.09 0.4757
mode 60 68.76 0.4759
mode 61 69.90 0.5161
mode 62 71.10 0.3670
mode 63 72.34 0.4407
mode 64 73.03 0.3593
mode 65 74.40 0.4347
mode 66 75.45 0.5439
mode 67 76.06 0.4017
mode 68 76.40 0.4035
mode 69 78.56 0.3298
mode 70 79.06 0.4853
mode 71 80.40 0.3458
mode 72 80.91 0.1250
mode 73 82.15 0.3767
mode 74 82.47 0.1571
mode 75 83.14 0.4247
mode 76 85.46 0.4408
mode 77 85.79 0.3942
mode 78 86.22 0.4546
mode 79 87.04 0.4782
mode 80 87.45 0.4354
mode 81 88.29 0.1974
mode 82 89.39 0.3397
mode 83 89.87 0.2345
mode 84 90.43 0.2513
mode 85 91.17 0.2551
mode 86 91.49 0.3737
mode 87 92.01 0.5001
mode 88 92.81 0.3292
mode 89 93.23 0.1705
mode 90 94.13 0.4098
mode 91 94.36 0.2683
mode 92 94.55 0.1081
mode 93 95.01 0.2474
mode 94 96.19 0.1947
mode 95 96.56 0.4759
mode 96 96.80 0.3536
mode 97 97.52 0.3462
mode 98 99.22 0.2685
mode 99 99.75 0.4222
mode 100 99.93 0.4123
mode 101 100.55 0.2514
mode 102 101.88 0.3537
mode 103 102.88 0.4368
mode 104 103.12 0.4729
mode 105 103.95 0.2278
mode 106 104.37 0.3199

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.