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***  ADENOSINE_KINASE  ***

Normal Mode Analysis for ID 220501084101121917

conformational change will be analysed

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: Rotation-translation modes have a cumulative overlap of 0.3190 !!! This probably means that the second conformation was not fitted properly onto the first one.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.4720 0.618 -127.4021
mode 8 1.26 0.4600 0.618 2.5019
mode 9 1.80 0.4348 0.649 -27.9939
mode 10 1.93 0.1577 0.658 -15.3265
mode 11 2.09 0.2850 0.661 -9.9182
mode 12 2.24 0.4095 0.674 17.8332
mode 13 2.34 0.4250 0.674 5.0944
mode 14 2.64 0.3976 0.674 2.0080
mode 15 2.71 0.3325 0.679 11.4603
mode 16 2.75 0.3744 0.681 -6.4545
mode 17 2.85 0.4436 0.682 6.6367
mode 18 3.12 0.6601 0.694 16.7713
mode 19 3.20 0.2573 0.694 -1.6122
mode 20 3.28 0.4895 0.694 1.3044
mode 21 3.43 0.4702 0.694 1.7775
mode 22 3.47 0.3994 0.696 7.8344
mode 23 3.53 0.6162 0.696 1.8389
mode 24 3.61 0.3956 0.697 2.5311
mode 25 3.69 0.4165 0.699 8.2482
mode 26 3.79 0.3176 0.699 1.4122
mode 27 3.86 0.4101 0.699 -1.4159
mode 28 3.87 0.4000 0.701 -5.1000
mode 29 4.02 0.3139 0.717 21.2753
mode 30 4.13 0.3829 0.719 5.4034
mode 31 4.24 0.5204 0.722 9.7549
mode 32 4.27 0.4061 0.722 4.0855
mode 33 4.32 0.3352 0.724 -3.5361
mode 34 4.37 0.3963 0.724 -1.1428
mode 35 4.42 0.3068 0.724 3.2530
mode 36 4.44 0.3352 0.725 6.0043
mode 37 4.51 0.3662 0.727 -6.5760
mode 38 4.55 0.3562 0.727 -3.1057
mode 39 4.62 0.2386 0.727 0.2617
mode 40 4.62 0.4898 0.734 12.1562
mode 41 4.71 0.3966 0.734 4.6554
mode 42 4.77 0.4475 0.734 -4.3053
mode 43 4.79 0.3663 0.735 -2.8175
mode 44 4.88 0.3661 0.735 2.1207
mode 45 4.96 0.4541 0.740 -11.9718
mode 46 5.01 0.3771 0.747 -12.5602
mode 47 5.03 0.4858 0.747 3.5851
mode 48 5.17 0.3280 0.747 -3.7223
mode 49 5.22 0.3272 0.749 5.3008
mode 50 5.22 0.3045 0.750 5.1765
mode 51 5.28 0.2901 0.750 0.8988
mode 52 5.31 0.4572 0.750 -1.1745
mode 53 5.35 0.2575 0.752 -8.6099
mode 54 5.37 0.4375 0.752 -2.4104
mode 55 5.45 0.2457 0.755 -8.0681
mode 56 5.50 0.4338 0.757 7.6304
mode 57 5.55 0.4442 0.758 -4.4061
mode 58 5.60 0.5004 0.758 1.0274
mode 59 5.70 0.5155 0.762 9.1376
mode 60 5.73 0.2613 0.762 -3.8210
mode 61 5.76 0.4681 0.762 -3.2517
mode 62 5.80 0.3419 0.762 -2.1651
mode 63 5.83 0.5058 0.762 -1.3504
mode 64 5.87 0.3472 0.763 -4.6872
mode 65 5.90 0.3537 0.768 10.6641
mode 66 5.93 0.3141 0.770 -8.4540
mode 67 5.96 0.5055 0.770 -0.0099
mode 68 5.96 0.3858 0.770 3.1499
mode 69 6.00 0.3211 0.770 1.7237
mode 70 6.03 0.3088 0.772 -2.2667
mode 71 6.06 0.3655 0.775 10.1924
mode 72 6.09 0.5036 0.775 2.1223
mode 73 6.13 0.3607 0.775 0.2153
mode 74 6.17 0.3149 0.775 -2.6201
mode 75 6.23 0.3519 0.775 -3.0450
mode 76 6.26 0.5346 0.777 -1.0144
mode 77 6.35 0.4304 0.777 -5.8988
mode 78 6.37 0.3380 0.778 4.9027
mode 79 6.40 0.3176 0.778 4.2257
mode 80 6.44 0.3249 0.782 8.6048
mode 81 6.49 0.3140 0.783 5.5692
mode 82 6.53 0.4481 0.783 -1.4435
mode 83 6.55 0.3217 0.783 -3.4794
mode 84 6.58 0.4706 0.785 6.8046
mode 85 6.62 0.4151 0.788 -9.7191
mode 86 6.66 0.4681 0.788 -0.2427
mode 87 6.73 0.4093 0.790 -5.5674
mode 88 6.74 0.3787 0.790 0.7868
mode 89 6.75 0.3907 0.791 7.0325
mode 90 6.79 0.3929 0.798 12.1733
mode 91 6.82 0.3636 0.798 0.7721
mode 92 6.84 0.4144 0.798 3.9982
mode 93 6.87 0.3935 0.798 2.7558
mode 94 6.88 0.4480 0.798 -0.1308
mode 95 6.92 0.2545 0.800 4.6406
mode 96 6.93 0.4558 0.800 -2.3386
mode 97 6.96 0.3440 0.800 -2.3932
mode 98 7.00 0.3654 0.800 -1.4175
mode 99 7.03 0.3055 0.800 2.5722
mode 100 7.05 0.4284 0.803 -9.9403
mode 101 7.07 0.3498 0.803 -1.2654
mode 102 7.09 0.3163 0.805 5.8771
mode 103 7.14 0.4158 0.805 -2.8435
mode 104 7.17 0.4327 0.805 -1.1153
mode 105 7.23 0.4623 0.806 5.5419
mode 106 7.25 0.4605 0.808 4.3028

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.