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***  Leucine binding protein  ***

Normal Mode Analysis for ID 22050108083495805

conformational change will be analysed

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.7493 0.881 -345.3382
mode 8 1.10 0.6504 0.884 -21.3499
mode 9 1.72 0.7423 0.887 20.1050
mode 10 3.06 0.7604 0.887 4.3224
mode 11 3.15 0.7673 0.914 60.3177
mode 12 3.51 0.7274 0.916 15.8321
mode 13 4.91 0.1324 0.916 2.9755
mode 14 5.07 0.2281 0.918 15.4422
mode 15 5.15 0.2984 0.918 0.1940
mode 16 5.69 0.3818 0.918 -8.6091
mode 17 5.73 0.1596 0.919 8.8102
mode 18 5.96 0.3585 0.919 -1.7515
mode 19 5.98 0.1040 0.919 1.0921
mode 20 6.09 0.3095 0.919 0.6496
mode 21 6.80 0.3396 0.919 -7.1744
mode 22 6.96 0.2494 0.919 -2.6339
mode 23 7.13 0.3321 0.920 -7.0621
mode 24 7.17 0.3254 0.920 -2.0801
mode 25 7.24 0.3124 0.922 14.9749
mode 26 7.38 0.4582 0.924 16.8310
mode 27 7.52 0.2261 0.925 13.5720
mode 28 7.59 0.4647 0.926 -10.9740
mode 29 7.90 0.5411 0.926 -0.6480
mode 30 8.06 0.5615 0.926 4.5165
mode 31 8.24 0.5326 0.926 5.4613
mode 32 8.30 0.5388 0.927 -9.1132
mode 33 8.44 0.4539 0.927 -0.9675
mode 34 8.66 0.4762 0.927 -3.4025
mode 35 8.70 0.4032 0.927 -6.7687
mode 36 8.81 0.5345 0.927 -4.8722
mode 37 8.88 0.5526 0.928 -4.5173
mode 38 8.99 0.5632 0.928 6.2898
mode 39 9.10 0.4686 0.930 16.3750
mode 40 9.21 0.5391 0.931 -12.9509
mode 41 9.33 0.5044 0.932 -8.6036
mode 42 9.34 0.3823 0.933 -14.9578
mode 43 9.43 0.2612 0.935 16.1665
mode 44 9.50 0.2506 0.935 -0.7158
mode 45 9.58 0.3262 0.935 -2.2201
mode 46 9.59 0.4053 0.936 -7.9596
mode 47 9.76 0.4133 0.936 6.2298
mode 48 9.84 0.3808 0.936 -1.9396
mode 49 9.89 0.2452 0.936 -0.9596
mode 50 10.00 0.3820 0.936 1.5835
mode 51 10.11 0.4898 0.938 17.8912
mode 52 10.12 0.4214 0.939 -11.7860
mode 53 10.17 0.2474 0.940 2.1954
mode 54 10.29 0.4652 0.940 -6.3678
mode 55 10.33 0.4177 0.940 -5.9724
mode 56 10.46 0.3572 0.941 -9.5245
mode 57 10.57 0.3418 0.941 2.0677
mode 58 10.67 0.3138 0.941 1.3007
mode 59 10.75 0.4702 0.941 2.9660
mode 60 10.86 0.4527 0.941 -1.4664
mode 61 10.97 0.3542 0.941 1.3151
mode 62 11.05 0.4535 0.941 3.3408
mode 63 11.15 0.3410 0.942 -10.3971
mode 64 11.15 0.3405 0.942 4.4798
mode 65 11.24 0.4277 0.943 13.3939
mode 66 11.31 0.4038 0.944 11.9619
mode 67 11.43 0.3426 0.945 5.9745
mode 68 11.53 0.3773 0.946 15.8298
mode 69 11.58 0.4986 0.947 3.4507
mode 70 11.72 0.3754 0.947 4.1355
mode 71 11.77 0.3086 0.947 -1.3474
mode 72 11.85 0.4972 0.947 7.6557
mode 73 11.94 0.4101 0.947 -2.0869
mode 74 11.98 0.3141 0.947 -5.7351
mode 75 12.05 0.4580 0.948 7.7015
mode 76 12.11 0.3524 0.948 -4.4917
mode 77 12.13 0.3760 0.948 0.9762
mode 78 12.20 0.3443 0.948 -6.0812
mode 79 12.37 0.2991 0.948 5.9995
mode 80 12.44 0.4007 0.949 -3.9891
mode 81 12.48 0.3332 0.949 6.0447
mode 82 12.53 0.3323 0.949 -8.5156
mode 83 12.57 0.5134 0.951 -16.6506
mode 84 12.59 0.4110 0.952 -3.0066
mode 85 12.68 0.4433 0.952 4.9627
mode 86 12.74 0.5034 0.952 0.5638
mode 87 12.77 0.3883 0.952 -10.1651
mode 88 12.93 0.4676 0.953 -8.7574
mode 89 12.93 0.3341 0.953 5.3834
mode 90 13.05 0.3672 0.954 12.7020
mode 91 13.08 0.4225 0.955 10.0604
mode 92 13.12 0.5045 0.955 -6.0132
mode 93 13.13 0.4974 0.956 -4.2030
mode 94 13.34 0.5075 0.956 -4.3572
mode 95 13.38 0.3806 0.956 9.5514
mode 96 13.43 0.3983 0.957 -4.8884
mode 97 13.47 0.2829 0.957 -5.3355
mode 98 13.52 0.3880 0.957 -5.6482
mode 99 13.53 0.4829 0.957 -3.2620
mode 100 13.58 0.4333 0.957 2.2260
mode 101 13.61 0.1979 0.957 -3.0000
mode 102 13.63 0.2595 0.958 -7.5140
mode 103 13.72 0.4470 0.958 -1.2062
mode 104 13.78 0.4972 0.959 12.4496
mode 105 13.83 0.3966 0.960 14.5459
mode 106 13.85 0.4136 0.961 -4.8237

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.