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Normal Mode Analysis for ID 22040120230993067

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0267
mode 8 1.14 0.4489
mode 9 1.25 0.3466
mode 10 1.46 0.4062
mode 11 1.65 0.0763
mode 12 1.77 0.1491
mode 13 2.02 0.3088
mode 14 2.11 0.3789
mode 15 2.26 0.4775
mode 16 2.32 0.6834
mode 17 2.43 0.2319
mode 18 2.60 0.6301
mode 19 2.68 0.5522
mode 20 2.82 0.1804
mode 21 2.86 0.1583
mode 22 2.90 0.4330
mode 23 2.98 0.1054
mode 24 3.05 0.2142
mode 25 3.13 0.3808
mode 26 3.17 0.5050
mode 27 3.21 0.3890
mode 28 3.23 0.3536
mode 29 3.32 0.3133
mode 30 3.35 0.3425
mode 31 3.38 0.2436
mode 32 3.40 0.1661
mode 33 3.51 0.3840
mode 34 3.54 0.5208
mode 35 3.60 0.4595
mode 36 3.65 0.1587
mode 37 3.67 0.3342
mode 38 3.73 0.4145
mode 39 3.77 0.3173
mode 40 3.83 0.4144
mode 41 3.86 0.3128
mode 42 3.90 0.2156
mode 43 3.91 0.2461
mode 44 3.94 0.3417
mode 45 3.96 0.3742
mode 46 3.98 0.2278
mode 47 4.04 0.3497
mode 48 4.09 0.4830
mode 49 4.13 0.4616
mode 50 4.16 0.3736
mode 51 4.19 0.2003
mode 52 4.21 0.3656
mode 53 4.27 0.3625
mode 54 4.32 0.3916
mode 55 4.34 0.3057
mode 56 4.38 0.3662
mode 57 4.44 0.3395
mode 58 4.44 0.1963
mode 59 4.45 0.3322
mode 60 4.48 0.3487
mode 61 4.49 0.2402
mode 62 4.51 0.2758
mode 63 4.52 0.3585
mode 64 4.57 0.3847
mode 65 4.61 0.4757
mode 66 4.65 0.2682
mode 67 4.68 0.3488
mode 68 4.70 0.2745
mode 69 4.72 0.3382
mode 70 4.74 0.3974
mode 71 4.79 0.2165
mode 72 4.82 0.2948
mode 73 4.86 0.3171
mode 74 4.87 0.2008
mode 75 4.90 0.4006
mode 76 4.91 0.4154
mode 77 4.95 0.3615
mode 78 4.97 0.3998
mode 79 5.00 0.4365
mode 80 5.04 0.5053
mode 81 5.05 0.3590
mode 82 5.07 0.5381
mode 83 5.08 0.4981
mode 84 5.14 0.4813
mode 85 5.15 0.3497
mode 86 5.17 0.4881
mode 87 5.23 0.4708
mode 88 5.26 0.4574
mode 89 5.30 0.2839
mode 90 5.31 0.4151
mode 91 5.38 0.3577
mode 92 5.43 0.4355
mode 93 5.46 0.4246
mode 94 5.46 0.4261
mode 95 5.48 0.3853
mode 96 5.54 0.4096
mode 97 5.57 0.3727
mode 98 5.60 0.2617
mode 99 5.60 0.3767
mode 100 5.63 0.4212
mode 101 5.64 0.4865
mode 102 5.67 0.3901
mode 103 5.69 0.3838
mode 104 5.70 0.3133
mode 105 5.71 0.1661
mode 106 5.76 0.3071

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.