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***  TRANSFERASE/DNA 02-DEC-10 3PTA  ***

Normal Mode Analysis for ID 22033011030760026

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4680
mode 8 1.18 0.5477
mode 9 1.33 0.4772
mode 10 1.59 0.4186
mode 11 1.68 0.3851
mode 12 1.89 0.5188
mode 13 2.02 0.3185
mode 14 2.15 0.2748
mode 15 2.20 0.4736
mode 16 2.34 0.5508
mode 17 2.44 0.1722
mode 18 2.62 0.3951
mode 19 2.80 0.4011
mode 20 2.88 0.4352
mode 21 3.04 0.6236
mode 22 3.24 0.3894
mode 23 3.27 0.1024
mode 24 3.40 0.4949
mode 25 3.54 0.0829
mode 26 3.63 0.3953
mode 27 3.65 0.2523
mode 28 3.75 0.1667
mode 29 3.87 0.2008
mode 30 3.95 0.4682
mode 31 4.14 0.2114
mode 32 4.21 0.2090
mode 33 4.27 0.4905
mode 34 4.39 0.4937
mode 35 4.61 0.2651
mode 36 4.68 0.3093
mode 37 4.83 0.4129
mode 38 4.86 0.2625
mode 39 4.91 0.4797
mode 40 4.99 0.2939
mode 41 5.16 0.1424
mode 42 5.21 0.0173
mode 43 5.24 0.4018
mode 44 5.27 0.3348
mode 45 5.34 0.4259
mode 46 5.46 0.3675
mode 47 5.57 0.3630
mode 48 5.58 0.4021
mode 49 5.74 0.3900
mode 50 5.99 0.2997
mode 51 6.04 0.1583
mode 52 6.18 0.2641
mode 53 6.23 0.1918
mode 54 6.34 0.2866
mode 55 6.41 0.0986
mode 56 6.49 0.1693
mode 57 6.58 0.3258
mode 58 6.65 0.0903
mode 59 6.71 0.2461
mode 60 6.82 0.0781
mode 61 6.85 0.2012
mode 62 6.94 0.2300
mode 63 6.97 0.2742
mode 64 7.00 0.0879
mode 65 7.02 0.1115
mode 66 7.08 0.3666
mode 67 7.13 0.4148
mode 68 7.18 0.3451
mode 69 7.26 0.4042
mode 70 7.30 0.2043
mode 71 7.40 0.1872
mode 72 7.42 0.2196
mode 73 7.52 0.2052
mode 74 7.53 0.2885
mode 75 7.59 0.2649
mode 76 7.63 0.1429
mode 77 7.68 0.3221
mode 78 7.76 0.3207
mode 79 7.83 0.2610
mode 80 7.85 0.2589
mode 81 7.94 0.3611
mode 82 8.01 0.1992
mode 83 8.06 0.3137
mode 84 8.19 0.2338
mode 85 8.22 0.3186
mode 86 8.35 0.4679
mode 87 8.38 0.3802
mode 88 8.47 0.2824
mode 89 8.49 0.4825
mode 90 8.57 0.3820
mode 91 8.64 0.4967
mode 92 8.68 0.4184
mode 93 8.77 0.3765
mode 94 8.87 0.4395
mode 95 8.94 0.2921
mode 96 8.99 0.3492
mode 97 9.04 0.3488
mode 98 9.05 0.4586
mode 99 9.07 0.2591
mode 100 9.10 0.4052
mode 101 9.17 0.3076
mode 102 9.19 0.2295
mode 103 9.23 0.3826
mode 104 9.23 0.3323
mode 105 9.32 0.1940
mode 106 9.37 0.2628

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.