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Normal Mode Analysis for ID 22032815312446073

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6401
mode 8 1.56 0.5395
mode 9 1.74 0.5645
mode 10 1.88 0.0043
mode 11 2.15 0.0784
mode 12 2.21 0.1043
mode 13 2.47 0.2383
mode 14 2.54 0.3796
mode 15 2.57 0.3581
mode 16 2.70 0.4828
mode 17 2.92 0.5514
mode 18 3.10 0.0887
mode 19 3.41 0.4546
mode 20 3.46 0.2809
mode 21 3.58 0.2375
mode 22 3.76 0.4911
mode 23 3.87 0.0741
mode 24 4.00 0.0621
mode 25 4.04 0.0379
mode 26 4.14 0.5416
mode 27 4.40 0.3972
mode 28 4.49 0.0927
mode 29 4.59 0.2064
mode 30 4.75 0.3656
mode 31 4.82 0.3836
mode 32 4.84 0.1583
mode 33 4.93 0.3686
mode 34 5.07 0.1663
mode 35 5.17 0.1777
mode 36 5.34 0.1181
mode 37 5.53 0.1501
mode 38 5.62 0.1267
mode 39 5.64 0.1990
mode 40 5.76 0.1969
mode 41 5.78 0.1518
mode 42 5.97 0.1398
mode 43 6.09 0.0859
mode 44 6.10 0.1272
mode 45 6.19 0.2422
mode 46 6.20 0.3193
mode 47 6.24 0.2270
mode 48 6.26 0.1761
mode 49 6.37 0.2183
mode 50 6.40 0.2539
mode 51 6.59 0.2302
mode 52 6.60 0.2122
mode 53 6.62 0.2590
mode 54 6.69 0.2099
mode 55 6.74 0.2720
mode 56 6.85 0.2908
mode 57 6.93 0.3080
mode 58 6.96 0.2814
mode 59 7.05 0.4435
mode 60 7.08 0.1872
mode 61 7.09 0.3079
mode 62 7.16 0.2933
mode 63 7.18 0.3820
mode 64 7.24 0.1360
mode 65 7.27 0.3245
mode 66 7.35 0.3787
mode 67 7.37 0.2471
mode 68 7.46 0.4050
mode 69 7.53 0.1137
mode 70 7.60 0.3119
mode 71 7.64 0.4291
mode 72 7.66 0.3727
mode 73 7.69 0.2277
mode 74 7.73 0.2938
mode 75 7.74 0.4142
mode 76 7.79 0.2894
mode 77 7.82 0.3236
mode 78 7.87 0.3831
mode 79 7.91 0.2701
mode 80 7.99 0.3501
mode 81 8.05 0.4430
mode 82 8.10 0.4576
mode 83 8.12 0.4439
mode 84 8.15 0.5291
mode 85 8.22 0.5211
mode 86 8.27 0.4895
mode 87 8.28 0.5006
mode 88 8.35 0.3983
mode 89 8.39 0.5035
mode 90 8.46 0.4449
mode 91 8.50 0.3715
mode 92 8.51 0.3901
mode 93 8.59 0.4515
mode 94 8.62 0.4453
mode 95 8.70 0.4772
mode 96 8.74 0.4574
mode 97 8.75 0.4980
mode 98 8.82 0.3539
mode 99 8.89 0.2257
mode 100 8.90 0.2327
mode 101 8.94 0.3205
mode 102 9.01 0.2347
mode 103 9.06 0.1450
mode 104 9.11 0.3925
mode 105 9.15 0.4265
mode 106 9.17 0.2631

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.