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***  VIRAL PROTEIN 19-DEC-21 7T9L  ***

Normal Mode Analysis for ID 220221231036115893

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6007
mode 8 1.42 0.5552
mode 9 2.06 0.6076
mode 10 2.48 0.4436
mode 11 2.71 0.3716
mode 12 3.23 0.2453
mode 13 3.58 0.3223
mode 14 3.93 0.1990
mode 15 4.28 0.3889
mode 16 4.54 0.1640
mode 17 4.77 0.2566
mode 18 5.13 0.3267
mode 19 5.22 0.0718
mode 20 5.52 0.2599
mode 21 5.57 0.3262
mode 22 5.84 0.3212
mode 23 6.04 0.2209
mode 24 6.17 0.2845
mode 25 6.49 0.3932
mode 26 6.61 0.2738
mode 27 6.95 0.4035
mode 28 7.05 0.5459
mode 29 7.25 0.3965
mode 30 7.58 0.2153
mode 31 7.65 0.4324
mode 32 7.96 0.3611
mode 33 8.09 0.3193
mode 34 8.26 0.1988
mode 35 8.35 0.4017
mode 36 8.59 0.4109
mode 37 8.67 0.4402
mode 38 8.87 0.5622
mode 39 8.95 0.2450
mode 40 9.12 0.3307
mode 41 9.27 0.3618
mode 42 9.42 0.3298
mode 43 9.52 0.4276
mode 44 9.60 0.3957
mode 45 9.69 0.3572
mode 46 9.83 0.5291
mode 47 9.96 0.1693
mode 48 10.19 0.3075
mode 49 10.35 0.4619
mode 50 10.40 0.3310
mode 51 10.48 0.2258
mode 52 10.52 0.3045
mode 53 10.59 0.5700
mode 54 10.74 0.3613
mode 55 10.96 0.2054
mode 56 11.07 0.2382
mode 57 11.14 0.4508
mode 58 11.29 0.5806
mode 59 11.47 0.3986
mode 60 11.57 0.3871
mode 61 11.62 0.2082
mode 62 11.93 0.5024
mode 63 11.97 0.4702
mode 64 12.01 0.4953
mode 65 12.17 0.5194
mode 66 12.24 0.5168
mode 67 12.34 0.4441
mode 68 12.47 0.5003
mode 69 12.62 0.2415
mode 70 12.77 0.4666
mode 71 12.85 0.4633
mode 72 12.93 0.5450
mode 73 13.11 0.3488
mode 74 13.19 0.0306
mode 75 13.24 0.3994
mode 76 13.35 0.4993
mode 77 13.39 0.4857
mode 78 13.50 0.4581
mode 79 13.55 0.4579
mode 80 13.72 0.2673
mode 81 13.76 0.5112
mode 82 13.84 0.1784
mode 83 13.89 0.4216
mode 84 13.98 0.4470
mode 85 14.08 0.2763
mode 86 14.23 0.3177
mode 87 14.26 0.4358
mode 88 14.31 0.0746
mode 89 14.43 0.4133
mode 90 14.48 0.3472
mode 91 14.53 0.3470
mode 92 14.54 0.2258
mode 93 14.70 0.4108
mode 94 14.75 0.5415
mode 95 15.00 0.4095
mode 96 15.04 0.4408
mode 97 15.23 0.2200
mode 98 15.27 0.3391
mode 99 15.33 0.4100
mode 100 15.39 0.5718
mode 101 15.51 0.5164
mode 102 15.60 0.4773
mode 103 15.67 0.5780
mode 104 15.72 0.4699
mode 105 15.77 0.3978
mode 106 15.87 0.5357

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.