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***  mexA_monomer  ***

Normal Mode Analysis for ID 22011814491968286

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0449
mode 8 1.34 0.0546
mode 9 1.71 0.5494
mode 10 1.94 0.4849
mode 11 3.19 0.7210
mode 12 3.62 0.6942
mode 13 3.88 0.0111
mode 14 5.21 0.6326
mode 15 6.06 0.5323
mode 16 6.66 0.1075
mode 17 6.84 0.2117
mode 18 7.52 0.2961
mode 19 7.69 0.3492
mode 20 8.50 0.7143
mode 21 11.19 0.5453
mode 22 12.08 0.5171
mode 23 12.98 0.1774
mode 24 13.12 0.2196
mode 25 14.45 0.5756
mode 26 16.33 0.6154
mode 27 16.66 0.2150
mode 28 17.56 0.6117
mode 29 17.80 0.3349
mode 30 19.49 0.0758
mode 31 20.32 0.1182
mode 32 20.97 0.5775
mode 33 21.84 0.3954
mode 34 22.09 0.3174
mode 35 22.37 0.4223
mode 36 23.28 0.4733
mode 37 23.69 0.4193
mode 38 25.31 0.0181
mode 39 26.38 0.2885
mode 40 26.76 0.6146
mode 41 27.41 0.3444
mode 42 28.08 0.6199
mode 43 29.29 0.4252
mode 44 29.83 0.5123
mode 45 30.16 0.2172
mode 46 30.67 0.1263
mode 47 31.77 0.4452
mode 48 32.61 0.2661
mode 49 33.32 0.1749
mode 50 34.49 0.3954
mode 51 35.15 0.2357
mode 52 35.73 0.2259
mode 53 36.24 0.1089
mode 54 37.07 0.3757
mode 55 37.19 0.0515
mode 56 38.55 0.1338
mode 57 38.88 0.3236
mode 58 39.18 0.0949
mode 59 39.59 0.2316
mode 60 39.94 0.2258
mode 61 41.14 0.3506
mode 62 41.95 0.2518
mode 63 42.10 0.3456
mode 64 42.60 0.3018
mode 65 43.51 0.2154
mode 66 43.97 0.4029
mode 67 44.37 0.4134
mode 68 45.30 0.4708
mode 69 45.75 0.1333
mode 70 46.42 0.4615
mode 71 46.64 0.4242
mode 72 47.11 0.4126
mode 73 47.17 0.3171
mode 74 48.64 0.3543
mode 75 49.23 0.2006
mode 76 49.76 0.3012
mode 77 50.42 0.5038
mode 78 50.97 0.3458
mode 79 51.14 0.4184
mode 80 51.36 0.1945
mode 81 51.46 0.0279
mode 82 51.90 0.3471
mode 83 52.24 0.3348
mode 84 52.64 0.2230
mode 85 53.11 0.1549
mode 86 53.37 0.1907
mode 87 54.02 0.3779
mode 88 54.18 0.2063
mode 89 54.50 0.3427
mode 90 54.71 0.2874
mode 91 55.23 0.3179
mode 92 55.71 0.2459
mode 93 55.90 0.3826
mode 94 56.11 0.4764
mode 95 56.64 0.4290
mode 96 56.68 0.4082
mode 97 57.17 0.1567
mode 98 57.30 0.3110
mode 99 57.95 0.4594
mode 100 58.17 0.2218
mode 101 58.43 0.3196
mode 102 58.94 0.4304
mode 103 58.96 0.3541
mode 104 59.50 0.4644
mode 105 60.00 0.5035
mode 106 60.19 0.3976

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.