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Normal Mode Analysis for ID 22010212453363483

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6543
mode 8 1.00 0.9171
mode 9 1.00 0.7999
mode 10 1.00 0.1581
mode 11 1.00 0.0534
mode 12 1.00 0.5790
mode 13 341.06 0.7314
mode 14 668.68 0.4081
mode 15 1166.35 0.4753
mode 16 1376.85 0.6951
mode 17 1968.41 0.5397
mode 18 3156.65 0.2656
mode 19 3406.24 0.4308
mode 20 4385.29 0.2822
mode 21 5182.21 0.2997
mode 22 5305.91 0.1453
mode 23 5522.38 0.2862
mode 24 5594.59 0.2913
mode 25 6239.24 0.1153
mode 26 6693.74 0.0544
mode 27 7509.21 0.3498
mode 28 8308.47 0.4596
mode 29 8507.62 0.5207
mode 30 8922.32 0.1529
mode 31 9264.82 0.1195
mode 32 9478.65 0.3203
mode 33 9929.21 0.1731
mode 34 10811.59 0.3839
mode 35 11091.03 0.2447
mode 36 11669.12 0.2711
mode 37 12303.12 0.1660
mode 38 12850.53 0.2271
mode 39 13523.47 0.1777
mode 40 14211.18 0.3579
mode 41 14509.50 0.3584
mode 42 15309.91 0.1448
mode 43 15610.12 0.2329
mode 44 16222.12 0.1662
mode 45 16693.15 0.2007
mode 46 17169.06 0.1330
mode 47 17870.62 0.2347
mode 48 18526.35 0.4923
mode 49 18617.00 0.4038
mode 50 19353.03 0.2298
mode 51 19583.56 0.1170
mode 52 19813.97 0.1690
mode 53 20130.62 0.2226
mode 54 21088.26 0.1693
mode 55 21232.88 0.1608
mode 56 21878.76 0.3195
mode 57 22360.65 0.3137
mode 58 22670.97 0.2081
mode 59 22970.41 0.0589
mode 60 23392.82 0.2398
mode 61 23523.26 0.4642
mode 62 23702.53 0.3459
mode 63 24046.44 0.5864
mode 64 24219.74 0.1099
mode 65 24259.71 0.2530
mode 66 24301.71 0.1465
mode 67 24919.26 0.1806
mode 68 25171.76 0.1804
mode 69 25615.59 0.1174
mode 70 26467.50 0.0975
mode 71 26895.65 0.1016
mode 72 27595.71 0.2228
mode 73 27748.68 0.1322
mode 74 27800.09 0.1888
mode 75 28227.91 0.2870
mode 76 28312.71 0.1603
mode 77 28989.12 0.2995
mode 78 29493.15 0.2585
mode 79 29510.44 0.2759
mode 80 29813.06 0.2813
mode 81 30061.76 0.2800
mode 82 30296.68 0.2189
mode 83 30422.65 0.3710
mode 84 30924.76 0.3059
mode 85 31561.38 0.3469
mode 86 31608.21 0.1812
mode 87 31704.88 0.1718
mode 88 31895.71 0.3591
mode 89 32239.24 0.1297
mode 90 33374.06 0.2874
mode 91 33541.74 0.2894
mode 92 33769.03 0.0814
mode 93 33829.38 0.2378
mode 94 34084.71 0.2943
mode 95 34970.94 0.2794
mode 96 35174.53 0.0951
mode 97 35420.15 0.1397
mode 98 35578.18 0.2968
mode 99 35706.94 0.3797
mode 100 36033.94 0.2531
mode 101 36118.76 0.1517
mode 102 36358.03 0.2153
mode 103 36776.41 0.1377
mode 104 37011.41 0.1487
mode 105 37272.29 0.2868
mode 106 37408.88 0.1617

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.