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***  MEMBRANE PROTEIN 03-OCT-98 1BXW  ***

Normal Mode Analysis for ID 211110112414111913

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1031
mode 8 1.11 0.1336
mode 9 1.20 0.2264
mode 10 1.44 0.4145
mode 11 1.64 0.1828
mode 12 1.79 0.5440
mode 13 2.17 0.4004
mode 14 2.46 0.1979
mode 15 2.57 0.2693
mode 16 2.65 0.2000
mode 17 2.92 0.1975
mode 18 3.17 0.2065
mode 19 3.24 0.2329
mode 20 3.31 0.2793
mode 21 3.41 0.3057
mode 22 3.48 0.1622
mode 23 3.59 0.4317
mode 24 3.62 0.2390
mode 25 3.91 0.1710
mode 26 3.99 0.3590
mode 27 4.26 0.4737
mode 28 4.56 0.3343
mode 29 4.62 0.2094
mode 30 4.65 0.3932
mode 31 4.78 0.3468
mode 32 4.92 0.3499
mode 33 5.05 0.3611
mode 34 5.11 0.3298
mode 35 5.20 0.2630
mode 36 5.31 0.2645
mode 37 5.47 0.1990
mode 38 5.55 0.3859
mode 39 5.59 0.2012
mode 40 5.74 0.2658
mode 41 5.76 0.2550
mode 42 5.85 0.4426
mode 43 6.07 0.3320
mode 44 6.12 0.3413
mode 45 6.21 0.2273
mode 46 6.32 0.3785
mode 47 6.38 0.2953
mode 48 6.42 0.3067
mode 49 6.45 0.3048
mode 50 6.58 0.3896
mode 51 6.65 0.4126
mode 52 6.69 0.3691
mode 53 6.87 0.3224
mode 54 6.92 0.4367
mode 55 6.98 0.3954
mode 56 7.05 0.4805
mode 57 7.08 0.3922
mode 58 7.14 0.3377
mode 59 7.19 0.3768
mode 60 7.34 0.4969
mode 61 7.36 0.4518
mode 62 7.42 0.2600
mode 63 7.45 0.5693
mode 64 7.56 0.3755
mode 65 7.61 0.3685
mode 66 7.70 0.4844
mode 67 7.77 0.2597
mode 68 7.82 0.3962
mode 69 7.85 0.5139
mode 70 7.96 0.0725
mode 71 7.97 0.3428
mode 72 8.02 0.2478
mode 73 8.16 0.1358
mode 74 8.23 0.3028
mode 75 8.25 0.4922
mode 76 8.31 0.3497
mode 77 8.39 0.3323
mode 78 8.42 0.2971
mode 79 8.48 0.2011
mode 80 8.55 0.4185
mode 81 8.58 0.4395
mode 82 8.61 0.2954
mode 83 8.68 0.4415
mode 84 8.74 0.3055
mode 85 8.81 0.0963
mode 86 8.82 0.1841
mode 87 8.90 0.2178
mode 88 8.96 0.1479
mode 89 8.99 0.3049
mode 90 9.02 0.3033
mode 91 9.07 0.5926
mode 92 9.14 0.3169
mode 93 9.16 0.3977
mode 94 9.19 0.2574
mode 95 9.26 0.4473
mode 96 9.27 0.2990
mode 97 9.32 0.4275
mode 98 9.37 0.3379
mode 99 9.41 0.4005
mode 100 9.48 0.3226
mode 101 9.51 0.4384
mode 102 9.54 0.2128
mode 103 9.59 0.3925
mode 104 9.60 0.5233
mode 105 9.68 0.2198
mode 106 9.71 0.5217

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.