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***  DUMMY FOR WHATIF 26-APR-56 GERT  ***

Normal Mode Analysis for ID 21081916261832265

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 4 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0107
mode 8 1.45 0.0048
mode 9 1.64 0.0148
mode 10 1.92 0.1114
mode 11 2.04 0.0614
mode 12 2.14 0.2174
mode 13 2.37 0.0857
mode 14 2.52 0.2781
mode 15 2.81 0.4215
mode 16 3.09 0.0104
mode 17 3.12 0.0515
mode 18 3.32 0.0190
mode 19 3.33 0.0444
mode 20 3.35 0.3622
mode 21 3.60 0.0137
mode 22 3.70 0.1801
mode 23 3.75 0.0488
mode 24 3.91 0.1110
mode 25 3.93 0.1042
mode 26 3.99 0.3529
mode 27 4.09 0.0269
mode 28 4.11 0.1130
mode 29 4.19 0.2851
mode 30 4.25 0.1182
mode 31 4.45 0.1979
mode 32 4.52 0.3389
mode 33 4.55 0.3898
mode 34 4.56 0.0517
mode 35 4.72 0.1890
mode 36 4.80 0.0243
mode 37 4.88 0.0323
mode 38 4.89 0.2518
mode 39 5.00 0.0119
mode 40 5.03 0.2650
mode 41 5.09 0.2030
mode 42 5.16 0.0152
mode 43 5.19 0.0808
mode 44 5.25 0.0661
mode 45 5.29 0.2240
mode 46 5.30 0.0665
mode 47 5.40 0.0628
mode 48 5.42 0.2556
mode 49 5.45 0.1229
mode 50 5.57 0.1434
mode 51 5.70 0.1869
mode 52 5.71 0.0864
mode 53 5.76 0.2400
mode 54 5.77 0.0400
mode 55 5.78 0.2447
mode 56 5.81 0.1175
mode 57 5.83 0.2509
mode 58 5.88 0.0741
mode 59 5.95 0.0147
mode 60 5.97 0.2944
mode 61 6.00 0.3703
mode 62 6.04 0.3709
mode 63 6.07 0.2555
mode 64 6.12 0.2243
mode 65 6.20 0.3258
mode 66 6.25 0.1837
mode 67 6.26 0.2339
mode 68 6.30 0.3082
mode 69 6.34 0.2756
mode 70 6.38 0.1999
mode 71 6.42 0.0515
mode 72 6.45 0.2629
mode 73 6.50 0.0371
mode 74 6.50 0.1301
mode 75 6.51 0.1760
mode 76 6.57 0.1098
mode 77 6.58 0.0681
mode 78 6.61 0.1754
mode 79 6.64 0.1726
mode 80 6.67 0.2293
mode 81 6.71 0.1965
mode 82 6.73 0.1345
mode 83 6.76 0.3712
mode 84 6.80 0.2980
mode 85 6.84 0.2345
mode 86 6.85 0.1238
mode 87 6.87 0.2268
mode 88 6.89 0.1604
mode 89 6.94 0.0405
mode 90 6.96 0.1170
mode 91 6.97 0.1861
mode 92 7.00 0.2650
mode 93 7.02 0.2430
mode 94 7.08 0.3421
mode 95 7.12 0.3483
mode 96 7.14 0.2550
mode 97 7.15 0.1684
mode 98 7.17 0.2106
mode 99 7.18 0.2086
mode 100 7.21 0.2103
mode 101 7.23 0.2114
mode 102 7.23 0.2139
mode 103 7.26 0.1155
mode 104 7.27 0.1666
mode 105 7.29 0.2775
mode 106 7.34 0.1347

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.