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***  TRANSFERASE 04-FEB-04 1S9I  ***

Normal Mode Analysis for ID 21080402425042499

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6627
mode 8 1.13 0.7331
mode 9 1.75 0.5061
mode 10 1.86 0.6468
mode 11 2.08 0.7181
mode 12 2.21 0.0145
mode 13 2.34 0.4863
mode 14 2.63 0.4578
mode 15 2.76 0.5633
mode 16 2.95 0.1257
mode 17 3.04 0.0480
mode 18 3.06 0.4150
mode 19 3.20 0.3229
mode 20 3.51 0.1465
mode 21 3.72 0.5135
mode 22 3.93 0.3487
mode 23 4.05 0.2895
mode 24 4.14 0.3997
mode 25 4.21 0.4416
mode 26 4.32 0.5765
mode 27 4.46 0.2636
mode 28 4.54 0.2997
mode 29 4.61 0.5664
mode 30 4.67 0.4225
mode 31 4.76 0.2593
mode 32 4.85 0.3282
mode 33 4.94 0.3333
mode 34 4.96 0.3850
mode 35 5.07 0.4730
mode 36 5.18 0.3798
mode 37 5.34 0.4253
mode 38 5.37 0.4144
mode 39 5.52 0.2320
mode 40 5.62 0.3904
mode 41 5.68 0.3786
mode 42 5.74 0.2737
mode 43 5.77 0.1618
mode 44 5.81 0.3461
mode 45 5.97 0.3682
mode 46 6.10 0.3150
mode 47 6.15 0.4387
mode 48 6.34 0.3569
mode 49 6.39 0.4211
mode 50 6.44 0.2889
mode 51 6.57 0.4691
mode 52 6.60 0.4521
mode 53 6.66 0.4257
mode 54 6.68 0.3640
mode 55 6.80 0.1760
mode 56 6.82 0.3365
mode 57 6.93 0.1288
mode 58 6.97 0.3262
mode 59 7.04 0.2457
mode 60 7.11 0.2744
mode 61 7.14 0.3746
mode 62 7.19 0.4384
mode 63 7.24 0.4226
mode 64 7.28 0.5230
mode 65 7.38 0.5025
mode 66 7.43 0.3184
mode 67 7.49 0.4857
mode 68 7.56 0.4124
mode 69 7.59 0.2989
mode 70 7.62 0.5666
mode 71 7.69 0.3615
mode 72 7.74 0.3892
mode 73 7.77 0.3970
mode 74 7.85 0.4950
mode 75 7.86 0.4012
mode 76 7.90 0.4145
mode 77 8.00 0.4305
mode 78 8.04 0.3690
mode 79 8.08 0.3707
mode 80 8.16 0.2243
mode 81 8.25 0.4203
mode 82 8.28 0.4110
mode 83 8.32 0.4833
mode 84 8.40 0.2749
mode 85 8.45 0.5104
mode 86 8.48 0.2960
mode 87 8.51 0.2600
mode 88 8.57 0.3051
mode 89 8.61 0.4617
mode 90 8.66 0.4136
mode 91 8.71 0.3388
mode 92 8.71 0.4275
mode 93 8.73 0.2706
mode 94 8.81 0.3005
mode 95 8.84 0.3237
mode 96 8.89 0.3843
mode 97 8.95 0.4422
mode 98 8.95 0.3000
mode 99 9.00 0.4165
mode 100 9.03 0.3927
mode 101 9.07 0.3759
mode 102 9.15 0.3272
mode 103 9.22 0.3201
mode 104 9.23 0.4230
mode 105 9.34 0.2360
mode 106 9.35 0.2648

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.