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***  6B73.C161.SM  ***

Normal Mode Analysis for ID 210720075300115338

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0169
mode 8 1.58 0.0148
mode 9 1.63 0.1293
mode 10 1.73 0.1158
mode 11 1.83 0.2410
mode 12 1.95 0.0836
mode 13 2.43 0.5248
mode 14 2.63 0.4888
mode 15 2.89 0.0966
mode 16 3.04 0.3573
mode 17 3.32 0.2554
mode 18 3.39 0.0469
mode 19 3.54 0.1691
mode 20 3.67 0.3473
mode 21 3.79 0.3572
mode 22 3.95 0.5841
mode 23 4.08 0.2801
mode 24 4.21 0.3000
mode 25 4.51 0.1303
mode 26 4.55 0.3761
mode 27 4.65 0.1744
mode 28 4.82 0.3309
mode 29 4.94 0.4574
mode 30 5.04 0.4050
mode 31 5.20 0.4646
mode 32 5.32 0.5184
mode 33 5.46 0.2797
mode 34 5.53 0.3150
mode 35 5.64 0.4683
mode 36 5.81 0.4513
mode 37 5.86 0.3604
mode 38 5.91 0.2605
mode 39 5.96 0.2822
mode 40 6.09 0.1881
mode 41 6.18 0.4062
mode 42 6.29 0.5332
mode 43 6.32 0.4801
mode 44 6.41 0.2431
mode 45 6.49 0.3759
mode 46 6.65 0.3843
mode 47 6.72 0.3899
mode 48 6.83 0.2518
mode 49 6.85 0.5059
mode 50 6.96 0.4279
mode 51 7.06 0.2800
mode 52 7.08 0.0810
mode 53 7.17 0.3857
mode 54 7.28 0.5342
mode 55 7.33 0.4767
mode 56 7.44 0.4141
mode 57 7.55 0.4146
mode 58 7.62 0.2981
mode 59 7.65 0.4568
mode 60 7.75 0.4231
mode 61 7.91 0.5064
mode 62 7.98 0.4781
mode 63 8.09 0.4981
mode 64 8.16 0.2905
mode 65 8.22 0.5118
mode 66 8.30 0.4411
mode 67 8.47 0.3436
mode 68 8.65 0.4436
mode 69 8.68 0.3428
mode 70 8.75 0.3722
mode 71 8.79 0.5294
mode 72 8.82 0.4213
mode 73 8.93 0.4019
mode 74 8.96 0.4831
mode 75 9.03 0.0140
mode 76 9.09 0.4079
mode 77 9.23 0.4413
mode 78 9.30 0.4133
mode 79 9.43 0.5039
mode 80 9.49 0.4715
mode 81 9.52 0.4327
mode 82 9.56 0.5138
mode 83 9.70 0.4305
mode 84 9.74 0.4359
mode 85 9.84 0.4328
mode 86 9.93 0.3419
mode 87 9.97 0.3120
mode 88 10.02 0.4147
mode 89 10.10 0.2833
mode 90 10.18 0.4181
mode 91 10.26 0.3854
mode 92 10.30 0.3424
mode 93 10.34 0.2268
mode 94 10.36 0.3330
mode 95 10.48 0.3424
mode 96 10.50 0.4306
mode 97 10.57 0.4725
mode 98 10.67 0.5616
mode 99 10.72 0.4969
mode 100 10.78 0.5177
mode 101 10.88 0.4354
mode 102 10.94 0.4877
mode 103 11.04 0.5079
mode 104 11.09 0.4589
mode 105 11.13 0.4956
mode 106 11.24 0.4951

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.