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***  6B73 No Ligand  ***

Normal Mode Analysis for ID 210714043906141057

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 3 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0174
mode 8 1.56 0.0824
mode 9 1.59 0.0381
mode 10 1.70 0.1081
mode 11 1.85 0.1731
mode 12 1.95 0.1056
mode 13 2.47 0.4942
mode 14 2.58 0.3791
mode 15 2.87 0.1967
mode 16 2.91 0.1914
mode 17 3.30 0.2392
mode 18 3.36 0.0717
mode 19 3.42 0.1400
mode 20 3.57 0.2190
mode 21 3.64 0.3673
mode 22 3.86 0.4366
mode 23 3.94 0.4402
mode 24 4.13 0.3825
mode 25 4.31 0.3169
mode 26 4.50 0.1806
mode 27 4.56 0.3982
mode 28 4.65 0.1147
mode 29 4.80 0.3571
mode 30 4.90 0.4394
mode 31 5.05 0.4395
mode 32 5.26 0.3731
mode 33 5.29 0.4532
mode 34 5.47 0.3977
mode 35 5.65 0.3270
mode 36 5.66 0.3958
mode 37 5.80 0.3857
mode 38 5.85 0.2867
mode 39 5.93 0.3399
mode 40 6.06 0.1629
mode 41 6.16 0.4296
mode 42 6.29 0.5171
mode 43 6.33 0.4009
mode 44 6.38 0.2643
mode 45 6.52 0.3650
mode 46 6.64 0.3507
mode 47 6.74 0.4476
mode 48 6.78 0.3385
mode 49 6.84 0.4028
mode 50 6.97 0.3072
mode 51 7.06 0.1132
mode 52 7.09 0.3306
mode 53 7.14 0.4816
mode 54 7.24 0.3644
mode 55 7.29 0.3959
mode 56 7.38 0.4416
mode 57 7.53 0.4716
mode 58 7.57 0.2429
mode 59 7.67 0.4553
mode 60 7.75 0.4277
mode 61 7.87 0.4305
mode 62 7.99 0.5254
mode 63 8.08 0.5561
mode 64 8.16 0.4452
mode 65 8.20 0.4809
mode 66 8.30 0.2081
mode 67 8.42 0.4135
mode 68 8.51 0.3849
mode 69 8.67 0.2958
mode 70 8.67 0.5285
mode 71 8.75 0.3887
mode 72 8.82 0.4506
mode 73 8.84 0.2966
mode 74 8.92 0.4763
mode 75 8.99 0.2355
mode 76 9.02 0.0130
mode 77 9.24 0.4118
mode 78 9.36 0.4907
mode 79 9.38 0.4154
mode 80 9.40 0.4321
mode 81 9.48 0.4427
mode 82 9.50 0.4223
mode 83 9.66 0.4499
mode 84 9.68 0.5336
mode 85 9.77 0.3052
mode 86 9.80 0.4184
mode 87 9.84 0.1428
mode 88 9.86 0.3642
mode 89 9.94 0.3984
mode 90 10.01 0.3417
mode 91 10.09 0.4632
mode 92 10.21 0.4346
mode 93 10.21 0.3357
mode 94 10.30 0.3268
mode 95 10.34 0.1956
mode 96 10.42 0.4564
mode 97 10.50 0.5327
mode 98 10.54 0.5077
mode 99 10.63 0.4729
mode 100 10.75 0.6278
mode 101 10.76 0.4527
mode 102 10.80 0.4447
mode 103 10.87 0.4447
mode 104 10.88 0.3415
mode 105 10.94 0.2089
mode 106 11.02 0.5005

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.