CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  4P8L V/S 4FDO MP  ***

Normal Mode Analysis for ID 20122622073737765

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4223
mode 8 1.02 0.4977
mode 9 1.32 0.5461
mode 10 1.36 0.3282
mode 11 1.43 0.1399
mode 12 1.53 0.3915
mode 13 1.60 0.4866
mode 14 1.66 0.7801
mode 15 1.71 0.7244
mode 16 1.88 0.3830
mode 17 1.94 0.5133
mode 18 2.03 0.6790
mode 19 2.05 0.7402
mode 20 2.09 0.5214
mode 21 2.16 0.4793
mode 22 2.21 0.0289
mode 23 2.29 0.4447
mode 24 2.33 0.3042
mode 25 2.36 0.3887
mode 26 2.42 0.5650
mode 27 2.43 0.4024
mode 28 2.50 0.2873
mode 29 2.53 0.4636
mode 30 2.57 0.5614
mode 31 2.63 0.5313
mode 32 2.66 0.4236
mode 33 2.70 0.6373
mode 34 2.75 0.3722
mode 35 2.78 0.3083
mode 36 2.83 0.4417
mode 37 2.85 0.4038
mode 38 2.87 0.5401
mode 39 2.90 0.4708
mode 40 2.94 0.3894
mode 41 2.95 0.4967
mode 42 2.96 0.5133
mode 43 2.98 0.4370
mode 44 3.04 0.6429
mode 45 3.06 0.4900
mode 46 3.10 0.2519
mode 47 3.12 0.4854
mode 48 3.15 0.4241
mode 49 3.18 0.3278
mode 50 3.24 0.5334
mode 51 3.29 0.5407
mode 52 3.33 0.5617
mode 53 3.34 0.4520
mode 54 3.36 0.4388
mode 55 3.37 0.5183
mode 56 3.38 0.3780
mode 57 3.46 0.5273
mode 58 3.49 0.3908
mode 59 3.51 0.5168
mode 60 3.52 0.5207
mode 61 3.57 0.4396
mode 62 3.58 0.5257
mode 63 3.60 0.5476
mode 64 3.63 0.5305
mode 65 3.65 0.4600
mode 66 3.69 0.5543
mode 67 3.73 0.4833
mode 68 3.74 0.4304
mode 69 3.76 0.6200
mode 70 3.78 0.4145
mode 71 3.80 0.4094
mode 72 3.83 0.5819
mode 73 3.85 0.4849
mode 74 3.87 0.3823
mode 75 3.90 0.5064
mode 76 3.92 0.4891
mode 77 3.93 0.4304
mode 78 3.93 0.4614
mode 79 3.97 0.4667
mode 80 4.02 0.4778
mode 81 4.04 0.4176
mode 82 4.07 0.5620
mode 83 4.08 0.2600
mode 84 4.09 0.2606
mode 85 4.11 0.6299
mode 86 4.15 0.4607
mode 87 4.16 0.5427
mode 88 4.17 0.4956
mode 89 4.18 0.5246
mode 90 4.21 0.3863
mode 91 4.22 0.4397
mode 92 4.25 0.4920
mode 93 4.26 0.4279
mode 94 4.27 0.5356
mode 95 4.30 0.4964
mode 96 4.32 0.4822
mode 97 4.34 0.5786
mode 98 4.36 0.6104
mode 99 4.39 0.3399
mode 100 4.39 0.4528
mode 101 4.40 0.5182
mode 102 4.42 0.5340
mode 103 4.44 0.4273
mode 104 4.45 0.4981
mode 105 4.49 0.4671
mode 106 4.50 0.4908

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.