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***  TRANSFERASE 06-JUN-08 3DDS  ***

Normal Mode Analysis for ID 201202161443130892

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6648
mode 8 1.06 0.7186
mode 9 1.42 0.6631
mode 10 1.97 0.6407
mode 11 2.06 0.5711
mode 12 2.37 0.6387
mode 13 2.56 0.4354
mode 14 2.65 0.6047
mode 15 2.93 0.2822
mode 16 3.03 0.4284
mode 17 3.09 0.2214
mode 18 3.32 0.6642
mode 19 3.38 0.5958
mode 20 3.70 0.2709
mode 21 3.89 0.1164
mode 22 4.12 0.2319
mode 23 4.28 0.3280
mode 24 4.35 0.4612
mode 25 4.46 0.5724
mode 26 4.56 0.4050
mode 27 4.61 0.3407
mode 28 4.63 0.1332
mode 29 4.77 0.5129
mode 30 4.84 0.4571
mode 31 4.90 0.3208
mode 32 4.98 0.2709
mode 33 4.99 0.3447
mode 34 5.07 0.1754
mode 35 5.15 0.4690
mode 36 5.23 0.5148
mode 37 5.26 0.2411
mode 38 5.32 0.4738
mode 39 5.39 0.5315
mode 40 5.57 0.3344
mode 41 5.60 0.3521
mode 42 5.74 0.3877
mode 43 5.79 0.4291
mode 44 5.84 0.2910
mode 45 5.94 0.5142
mode 46 6.03 0.3343
mode 47 6.07 0.4768
mode 48 6.09 0.4406
mode 49 6.24 0.3355
mode 50 6.27 0.4025
mode 51 6.43 0.5157
mode 52 6.47 0.3574
mode 53 6.61 0.4109
mode 54 6.63 0.3730
mode 55 6.69 0.3299
mode 56 6.77 0.4014
mode 57 6.80 0.3795
mode 58 6.84 0.4579
mode 59 6.85 0.3873
mode 60 6.93 0.4967
mode 61 6.95 0.2797
mode 62 7.07 0.3452
mode 63 7.11 0.4369
mode 64 7.21 0.4624
mode 65 7.22 0.4728
mode 66 7.31 0.5477
mode 67 7.37 0.5928
mode 68 7.41 0.5462
mode 69 7.47 0.2824
mode 70 7.50 0.3781
mode 71 7.55 0.5279
mode 72 7.57 0.5583
mode 73 7.63 0.3640
mode 74 7.64 0.4588
mode 75 7.67 0.3422
mode 76 7.74 0.3940
mode 77 7.76 0.2497
mode 78 7.84 0.5772
mode 79 7.87 0.5107
mode 80 7.97 0.4296
mode 81 8.02 0.3674
mode 82 8.05 0.4542
mode 83 8.06 0.5127
mode 84 8.11 0.5330
mode 85 8.19 0.3303
mode 86 8.21 0.3801
mode 87 8.28 0.4548
mode 88 8.32 0.2750
mode 89 8.34 0.4836
mode 90 8.37 0.2478
mode 91 8.42 0.4443
mode 92 8.49 0.3104
mode 93 8.50 0.3042
mode 94 8.58 0.4110
mode 95 8.58 0.4829
mode 96 8.65 0.4476
mode 97 8.69 0.2605
mode 98 8.73 0.4532
mode 99 8.75 0.5664
mode 100 8.80 0.5443
mode 101 8.85 0.5343
mode 102 8.87 0.3686
mode 103 8.91 0.3862
mode 104 8.95 0.2973
mode 105 9.01 0.5487
mode 106 9.08 0.4325

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.