CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***    ***

Normal Mode Analysis for ID 20092315384935428

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7121
mode 8 1.03 0.7101
mode 9 2.49 0.7778
mode 10 2.51 0.7662
mode 11 2.78 0.6736
mode 12 3.45 0.8529
mode 13 4.04 0.7825
mode 14 4.37 0.6696
mode 15 5.69 0.5939
mode 16 6.03 0.6761
mode 17 7.16 0.6103
mode 18 8.58 0.6123
mode 19 9.05 0.5870
mode 20 10.29 0.7892
mode 21 11.00 0.5679
mode 22 11.17 0.5465
mode 23 11.88 0.7925
mode 24 13.13 0.5494
mode 25 13.32 0.5615
mode 26 14.66 0.6769
mode 27 15.03 0.4625
mode 28 15.19 0.6724
mode 29 16.47 0.4687
mode 30 16.59 0.4396
mode 31 17.53 0.6267
mode 32 18.08 0.6256
mode 33 18.32 0.7085
mode 34 18.63 0.6779
mode 35 19.26 0.6953
mode 36 19.90 0.6713
mode 37 19.97 0.6808
mode 38 20.88 0.5923
mode 39 21.28 0.6646
mode 40 21.64 0.6955
mode 41 21.78 0.6276
mode 42 22.39 0.5223
mode 43 22.97 0.5242
mode 44 23.27 0.5664
mode 45 23.52 0.4382
mode 46 23.74 0.6349
mode 47 24.17 0.4751
mode 48 24.34 0.4408
mode 49 24.82 0.5170
mode 50 25.26 0.5129
mode 51 25.43 0.5916
mode 52 25.54 0.6434
mode 53 25.80 0.4676
mode 54 26.29 0.5026
mode 55 26.75 0.4841
mode 56 26.78 0.6197
mode 57 27.10 0.6207
mode 58 27.21 0.6144
mode 59 27.60 0.5598
mode 60 27.94 0.5333
mode 61 28.07 0.6167
mode 62 28.25 0.4771
mode 63 28.43 0.5604
mode 64 28.59 0.5194
mode 65 28.70 0.4686
mode 66 28.93 0.4814
mode 67 29.01 0.6121
mode 68 29.14 0.4603
mode 69 29.24 0.6009
mode 70 29.39 0.4552
mode 71 29.42 0.4983
mode 72 29.49 0.5033
mode 73 29.65 0.4667
mode 74 29.65 0.5119
mode 75 29.72 0.4920
mode 76 29.76 0.6173
mode 77 29.80 0.4796
mode 78 29.89 0.4013
mode 79 29.92 0.4806
mode 80 30.00 0.4625
mode 81 30.11 0.4240
mode 82 30.19 0.4711
mode 83 30.28 0.4765
mode 84 30.37 0.5408
mode 85 30.42 0.5847
mode 86 30.45 0.4694
mode 87 30.56 0.5009
mode 88 30.69 0.4807
mode 89 30.74 0.4970
mode 90 30.86 0.5231
mode 91 30.96 0.2469
mode 92 30.98 0.2686
mode 93 31.12 0.4543
mode 94 31.15 0.4901
mode 95 31.19 0.4248
mode 96 31.25 0.4023
mode 97 31.31 0.1625
mode 98 31.62 0.5384
mode 99 31.75 0.3966
mode 100 32.13 0.4954
mode 101 32.24 0.6220
mode 102 32.37 0.4821
mode 103 32.44 0.6227
mode 104 32.53 0.6248
mode 105 32.84 0.4872
mode 106 32.90 0.6148

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.